RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CTNSO60931 367 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 HIST1H1CP16403 213 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ADRA2CP18825 462 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 PJVKQ0ZLH3 352 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OR4C11Q6IEV9 310 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF793Q6ZN11 406 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 GABRG1Q8N1C3 465 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF561Q8N587 486 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 DMBX1Q8NFW5 382 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OR4K14Q8NGD5 310 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 PRO1933Q9H354 126 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 FN3KRPQ9HA64 309 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 TET1Q8NFU7 2136 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 KIF26AQ9ULI4 1882 aaPredicted RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF729A6NN14 1252 aaPredicted RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 C2orf74A8MZ97 194 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 K7ESM1 405 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 FBXO24O75426 580 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 LEFTY1O75610 366 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ID2Q02363 134 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC9A5Q14940 896 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF676Q8N7Q3 588 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OR56A1Q8NGH5 318 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 SLAMF9Q96A28 289 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 NMNAT3Q96T66 252 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 LGR4Q9BXB1 951 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 POTEKPQ9BYX7 375 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 TAS2R8Q9NYW2 309 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 YIPF1Q9Y548 306 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 HEATR5BQ9P2D3 2071 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 TRAV8-7A0A075B6U6 113 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ELOA3DA6NLF2 546 aaPredicted RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 H7C4K7 107 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 MED6O75586 246 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 OR8U8P0C7N1 319 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 HMGA1P17096 107 aaKnown RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 CSNK2A2P19784 350 aaPredicted RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 NR0B2Q15466 257 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 USF2Q15853 346 aaPredicted RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ELOA3BQ3SY89 546 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ABHD13Q7L211 337 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 PPP1R3BQ86XI6 285 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ELOA3Q8NG57 546 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 OR10AC1Q8NH08 325 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 OR5K2Q8NHB8 316 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNRF4Q8WWF5 429 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ADAP2Q9NPF8 381 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 CALML5Q9NZT1 146 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SLC25A13Q9UJS0 675 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ABT1Q9ULW3 272 aaKnown RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 RHOP08100 348 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 POU3F4P49335 361 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ACTR1AP61163 376 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ADAM8P78325 824 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SSX2Q16385 188 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 OR4K17Q8NGC6 315 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 FOXRED1Q96CU9 486 aaPredicted RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 MRPL38Q96DV4 380 aaKnown RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 PHYHIPLQ96FC7 376 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SEMA6CQ9H3T2 930 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SFXN1Q9H9B4 322 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ACKR4Q9NPB9 350 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SIGLEC7Q9Y286 467 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 SPEGQ15772 3267 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 NDUFB7P17568 137 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 IRF5Q13568 498 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 FAM129CQ86XR2 697 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF615Q8N8J6 731 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 ZDHHC12Q96GR4 267 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
GAPVD1-220ENST00000497580 A0A1W2PR48 441 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 EMC8O43402 210 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 PBX2P40425 430 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TMEM205Q6UW68 189 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TMPPEQ6ZT21 453 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 RNF44Q7L0R7 432 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 UBE3DQ7Z6J8 389 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 PARGQ86W56 976 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 SEMA6DQ8NFY4 1073 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 TSEN15Q8WW01 171 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-220ENST00000497580 WDR34Q96EX3 536 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms