RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MTNR1AP48039 350 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 RAB40BQ12829 278 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 KLHL22Q53GT1 634 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 SLC35D3Q5M8T2 416 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 RNLSQ5VYX0 342 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 LEG1Q6P5S2 330 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 AHSA2Q719I0 299 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 HDDC2Q7Z4H3 204 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 SIAH3Q8IW03 269 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 SPARTQ8N0X7 666 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 DEFB127Q9H1M4 99 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 MED20Q9H944 212 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 NPIPA1Q9UND3 350 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
VPS26A-209ENST00000497564 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 DOPEY1Q5JWR5 2465 aa12.65□□□□□ -0.38
VPS26A-209ENST00000497564 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 H0YC42 278 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 XKRYO14609 159 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 CXCL13O43927 109 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 BCL10O95999 233 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 RENP00797 406 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 CPN1P15169 458 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 IFNGR1P15260 489 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 ATP6V1B1P15313 513 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 NR1H2P55055 460 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
VPS26A-209ENST00000497564 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 LCN1P1Q5VSP4 162 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 KDM8Q8N371 416 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 ZPLD1Q8TCW7 415 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 KISS1RQ969F8 398 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-209ENST00000497564 LGALS12Q96DT0 336 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 RNFT2Q96EX2 444 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 ADAD1Q96M93 576 aaKnown RBP12.64□□□□□ -0.39
VPS26A-209ENST00000497564 TEAD3Q99594 435 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 TSPAN10Q9H1Z9 355 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-209ENST00000497564 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 BATF3Q9NR55 127 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 KLHL13Q9P2N7 655 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
VPS26A-209ENST00000497564 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
VPS26A-209ENST00000497564 AQP7O14520 342 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 ARHGEF9O43307 516 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 RAMP1O60894 148 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 SERPINI2O75830 405 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 MT-ND2P03891 347 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 TFAP2AP05549 437 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 STSP08842 583 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 ZNF43P17038 809 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 JUNBP17275 347 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-209ENST00000497564 SPI1P17947 270 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 KLK2P20151 261 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 PCMT1P22061 227 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
VPS26A-209ENST00000497564 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
VPS26A-209ENST00000497564 ALDH3B2P48448 385 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 SLC16A1P53985 500 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 MVKQ03426 396 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 GGTLC2Q14390 218 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 IRF3Q14653 427 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 SLC17A1Q14916 467 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 STX19Q8N4C7 294 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 FAR1Q8WVX9 515 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 TMEM80Q96HE8 168 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 UCN2Q96RP3 112 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 ALG12Q9BV10 488 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 JAM3Q9BX67 310 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 CDCA4Q9BXL8 241 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 DIMT1Q9UNQ2 313 aaKnown RBP12.63□□□□□ -0.39
VPS26A-209ENST00000497564 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
VPS26A-209ENST00000497564 FKBP7Q9Y680 259 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms