RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	MOGAT1	Q96PD6	335 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	SLC38A2	Q96QD8	506 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	OR2M2	Q96R28	347 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	TNFRSF13C	Q96RJ3	184 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	SF3B5	Q9BWJ5	86 aa	Known RBP	4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	LINC00470	Q9BZP3	86 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	KCNK9	Q9NPC2	374 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	SERINC1	Q9NRX5	453 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	THAP1	Q9NVV9	213 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	ADPRHL2	Q9NX46	363 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	B3GNT2	Q9NY97	397 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	MYEF2	Q9P2K5	600 aa	Known RBP	4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	AMDHD2	Q9Y303	409 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	USH1C	Q9Y6N9	552 aa		4.75	□□□□□ -1.65
UBE3C-208	ENST00000497368	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368		A0A0G2JPF8	293 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CIB4	A0PJX0	185 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CCT8L1P	A6NM43	557 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368		A8MVM7	634 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HNRNPCL2	B2RXH8	293 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HNRNPCL3	B7ZW38	293 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MS4A18	H0YCH9	400 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368		M0R3H8	397 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PHF1	O43189	567 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TLX2	O43763	284 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	EIF1B	O60739	113 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HNRNPCL1	O60812	293 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NCR1	O76036	304 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	KRT75	O95678	551 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	IL6	P05231	212 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	GPI	P06744	558 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HNRNPCL4	P0DMR1	293 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	IL7R	P16871	459 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ZNF14	P17017	642 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	GRPR	P30550	384 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PRKAR1B	P31321	381 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CRAT	P43155	626 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	RPS5	P46782	204 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	FABP6	P51161	128 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NUDT6	P53370	316 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CRISP3	P54108	245 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CLDN17	P56750	224 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TXNL4A	P83876	142 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HPCA	P84074	193 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ARF1	P84077	181 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ROR2	Q01974	943 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TRIP10	Q15642	601 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	EFNB3	Q15768	340 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NRF1	Q16656	503 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	GSTA3	Q16772	222 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MS4A18	Q3C1V0	323 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HHAT	Q5VTY9	493 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	AGAP6	Q5VW22	663 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PRAMEF8	Q5VWM4	474 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PRAMEF7	Q5VXH5	474 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ATG16L1	Q676U5	607 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CGB2	Q6NT52	195 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NIPAL3	Q6P499	406 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	AAED1	Q7RTV5	226 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	SLC46A3	Q7Z3Q1	461 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NET1	Q7Z628	596 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MDP1	Q86V88	176 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CARM1	Q86X55	608 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	RBM45	Q8IUH3	476 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PEX5L	Q8IYB4	626 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	LSMEM1	Q8N8F7	131 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	POMGNT2	Q8NAT1	580 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ADPRHL1	Q8NDY3	354 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	OR5AN1	Q8NGI8	311 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MFSD8	Q8NHS3	518 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	SPATA3	Q8NHX4	192 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	BBS10	Q8TAM1	723 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PMM1	Q92871	262 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	SLC35B4	Q969S0	331 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	DDIT4L	Q96D03	193 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MSI2	Q96DH6	328 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	MUCL1	Q96DR8	90 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TRIM44	Q96DX7	344 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ZHX1-C8orf76	Q96EF9	292 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TRMT61A	Q96FX7	289 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ITCH	Q96J02	903 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TXNDC15	Q96J42	360 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	HS6ST2	Q96MM7	605 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	C7orf26	Q96N11	449 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ARHGDIG	Q99819	225 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PAIP2	Q9BPZ3	127 aa	Known RBP	4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PRSS27	Q9BQR3	290 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	ZNF426	Q9BUY5	554 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	KATNB1	Q9BVA0	655 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CENPH	Q9H3R5	247 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	PLK3	Q9H4B4	646 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	GPR35	Q9HC97	309 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	NGB	Q9NPG2	151 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	FANCF	Q9NPI8	374 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	YAE1D1	Q9NRH1	226 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	CA10	Q9NS85	328 aa		4.74	□□□□□ -1.65
UBE3C-208	ENST00000497368	TMEM160	Q9NX00	188 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms