RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SLC38A2Q96QD8 506 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 OR2A5Q96R48 311 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 VCX2Q9H322 139 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 YY1AP1Q9H869 796 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 LRRC40Q9H9A6 602 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 MRPL47Q9HD33 250 aaKnown RBP1.99□□□□□ -2.09
CD46-218ENST00000496723 SMOXQ9NWM0 555 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 CD84Q9UIB8 345 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 CDH9Q9ULB4 789 aa1.99□□□□□ -2.09
CD46-218ENST00000496723 IGLV3-22A0A075B6J6 115 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 IGHV3-66A0A0C4DH42 116 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 A0A1W2PP18 115 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 CIB4A0PJX0 185 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 CLRN2A0PK11 232 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 GOLGA8SH3BPF8 625 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 ZNF208O43345 1280 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 UBTFL1P0CB47 393 aaPredicted RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 SMIM10L1P0DMW3 83 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 ZNF14P17017 642 aaPredicted RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 SLC2A5P22732 501 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 ACTR1AP61163 376 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 AQP6Q13520 282 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 KLHL38Q2WGJ6 581 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 SFT2D3Q587I9 215 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 KPRPQ5T749 579 aaPredicted RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 OR4F3Q6IEY1 312 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 RGS9BPQ6ZS82 235 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 LINC00173Q6ZV60 143 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 NUDCD3Q8IVD9 361 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 ZNF679Q8IYX0 411 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 TBC1D21Q8IYX1 336 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 ARRDC1Q8N5I2 433 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 MFSD9Q8NBP5 474 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 TRPV1Q8NER1 839 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 PYROXD1Q8WU10 500 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 PHF10Q8WUB8 498 aaKnown RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 GEMIN6Q8WXD5 167 aaKnown RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 COQ2Q96H96 371 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 SMIM10Q96HG1 83 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 CRACR2AQ9BSW2 395 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 TMEM43Q9BTV4 400 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 GABARAPL3Q9BY60 117 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 NT5C3AQ9H0P0 336 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 UGT1A7Q9HAW7 530 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 UGT1A10Q9HAW8 530 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 UGT1A8Q9HAW9 530 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 POLE4Q9NR33 117 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 EXD2Q9NVH0 621 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 EXTL2Q9UBQ6 330 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 PACSIN2Q9UNF0 486 aaPredicted RBP1.98□□□□□ -2.09
CD46-218ENST00000496723 N6AMT1Q9Y5N5 214 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 KANK1Q14678 1352 aa1.98□□□□□ -2.09
CD46-218ENST00000496723 IGKV1D-13A0A0B4J2D9 117 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 IGHV5-51A0A0C4DH38 117 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 IGKV1-13P0DP09 117 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 PRPS2P11908 318 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 TCN1P20061 433 aaPredicted RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 GDI1P31150 447 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 RORAP35398 523 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 GPR6P46095 362 aaPredicted RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 NPBWR2P48146 333 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 CCT3P49368 545 aaKnown RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 DUSP3P51452 185 aaPredicted RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 NCBP2P52298 156 aaKnown RBP eCLIP1.97□□□□□ -2.09
CD46-218ENST00000496723 ARFIP1P53367 373 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 CHRFAM7AQ494W8 412 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 FILIP1LQ4L180 1135 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 VAX1Q5SQQ9 334 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 EFL1Q7Z2Z2 1120 aaKnown RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 C15orf56Q8N910 161 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 MAGEE2Q8TD90 523 aaPredicted RBP1.97□□□□□ -2.09
CD46-218ENST00000496723 SDR42E1Q8WUS8 393 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 SGK3Q96BR1 496 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 TSSK3Q96PN8 268 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 COPS8Q99627 209 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 PARD6BQ9BYG5 372 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 ADAP2Q9NPF8 381 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 CLEC4AQ9UMR7 237 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 MSH6P52701 1360 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 CEMIPQ8WUJ3 1361 aa1.97□□□□□ -2.09
CD46-218ENST00000496723 PLA2R1Q13018 1463 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 A0A1B0GVI7 797 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 ZNF705GA8MUZ8 300 aaPredicted RBP1.96□□□□□ -2.1
CD46-218ENST00000496723 UPK3AO75631 287 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 GAPDHP04406 335 aaKnown RBP1.96□□□□□ -2.1
CD46-218ENST00000496723 CAPN1P07384 714 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 PSMC3P17980 439 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 OPRD1P41143 372 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 EPS15P42566 896 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 MAGEA8P43361 318 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 CYB561P49447 251 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 CCR8P51685 355 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 SUB1P53999 127 aaKnown RBP eCLIP1.96□□□□□ -2.1
CD46-218ENST00000496723 AIF1P55008 147 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 RPS21P63220 83 aaKnown RBP1.96□□□□□ -2.1
CD46-218ENST00000496723 SLC7A9P82251 487 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 CDK16Q00536 496 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 SCRN3Q0VDG4 424 aa1.96□□□□□ -2.1
CD46-218ENST00000496723 IL24Q13007 206 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms