RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-209ENST00000496445 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
VTI1A-209ENST00000496445 UGT2B15P54855 530 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 PIGFQ07326 219 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
VTI1A-209ENST00000496445 DAG1Q14118 895 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 SNX32Q86XE0 403 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 PFN4Q8NHR9 129 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 ZNF583Q96ND8 569 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 DOK1Q99704 481 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 PIMREGQ9BSJ6 248 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 GLTPQ9NZD2 209 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 STAB1Q9NY15 2570 aa12.33□□□□□ -0.44
VTI1A-209ENST00000496445 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 NDUFS8O00217 210 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 RNF13O43567 381 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-209ENST00000496445 OR6A2O95222 327 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 PGA4P0DJD7 388 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 ZNF35P13682 527 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 NR4A1P22736 598 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 NR4A2P43354 598 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 GIPRP48546 466 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
VTI1A-209ENST00000496445 GGTLC2Q14390 218 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 MMEL1Q495T6 779 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 CXXC5Q7LFL8 322 aaKnown RBP12.32□□□□□ -0.44
VTI1A-209ENST00000496445 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 ZCCHC24Q8N2G6 241 aaKnown RBP12.32□□□□□ -0.44
VTI1A-209ENST00000496445 IL17RDQ8NFM7 739 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 SH3GL1Q99961 368 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 ECSITQ9BQ95 431 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-209ENST00000496445 C20orf141Q9NUB4 165 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 SH3GLB1Q9Y371 365 aa12.32□□□□□ -0.44
VTI1A-209ENST00000496445 FBN3Q75N90 2809 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 LOC390937A0A1W2PQ73 354 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 FAM220BPB1ANY3 271 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 UBL3O95164 117 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 OR5F1O95221 314 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 NPPAP01160 153 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 MT-ND1P03886 318 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 UMPSP11172 480 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 OR1E2P47887 323 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 TAS2R41P59536 307 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 RAB1AP62820 205 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 GUCY1A3Q02108 690 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 RPL18Q07020 188 aaKnown RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 PIN1Q13526 163 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 MAPRE2Q15555 327 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 CARTPTQ16568 116 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 C10orf82Q8WW14 230 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 ZNF566Q969W8 418 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 SLC25A44Q96H78 314 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 FOXN4Q96NZ1 517 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 MRPL37Q9BZE1 423 aaKnown RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 POLR2J2Q9GZM3 115 aaKnown RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 POLR2J3Q9H1A7 115 aaKnown RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 MRGBPQ9NV56 204 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 TMEM38BQ9NVV0 291 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 TMEM160Q9NX00 188 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
VTI1A-209ENST00000496445 BAG5Q9UL15 447 aa12.31□□□□□ -0.44
VTI1A-209ENST00000496445 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 KRT34O76011 436 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 OR7A10O76100 309 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 RAB36O95755 333 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 TSPAN19P0C672 248 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 RBM34P42696 430 aaKnown RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 RAB39AQ14964 217 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 FXNQ16595 210 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 CHRFAM7AQ494W8 412 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 LRRC23Q53EV4 343 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 CYBRD1Q53TN4 286 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 CYB5R2Q6BCY4 276 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 ERICH5Q6P6B1 374 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 PIWIL3Q7Z3Z3 882 aaKnown RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 ASB10Q8WXI3 467 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 SEPHS2Q99611 448 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
VTI1A-209ENST00000496445 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-209ENST00000496445 CCDC134Q9H6E4 229 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms