RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ARHGDIGQ99819 225 aa19.98■□□□□ 0.79
COL27A1-208ENST00000494780 SYT3Q9BQG1 590 aa19.98■□□□□ 0.79
COL27A1-208ENST00000494780 CPPED1Q9BRF8 314 aaPredicted RBP19.98■□□□□ 0.79
COL27A1-208ENST00000494780 C11orf98E9PRG8 122 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 CHP2O43745 196 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 ENTPD5O75356 428 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 OR6A2O95222 327 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 LSP1P33241 339 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 RBBP4Q09028 425 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 CCNIQ14094 377 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 RUNDC3AQ59EK9 446 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 BEND6Q5SZJ8 279 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-208ENST00000494780 AGBL2Q5U5Z8 902 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 SMYD1Q8NB12 490 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 C11orf65Q8NCR3 313 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 OR6X1Q8NH79 312 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 RDH5Q92781 318 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 GLTPQ9NZD2 209 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 NBEAL1Q6ZS30 2694 aa19.97■□□□□ 0.79
COL27A1-208ENST00000494780 B4DSR2 109 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 M0R3H8 397 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 HAX1O00165 279 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 HPXP02790 462 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 ALDH3B1P43353 468 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 GPR6P46095 362 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-208ENST00000494780 ZP4Q12836 540 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 RAB39AQ14964 217 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 SLC35D2Q76EJ3 337 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 PTOV1Q86YD1 416 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 SKA3Q8IX90 412 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 RABEP2Q9H5N1 569 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 SLC7A8Q9UHI5 535 aa19.96■□□□□ 0.79
COL27A1-208ENST00000494780 M0QX08 132 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 SERPINA5P05154 406 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 TCN1P20061 433 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-208ENST00000494780 ACHEP22303 614 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 COL8A2P25067 703 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 SEC24CP53992 1094 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 NPTX1Q15818 432 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF74Q16587 644 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 DUSP7Q16829 419 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 WDR88Q6ZMY6 472 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 LRP11Q86VZ4 500 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF584Q8IVC4 421 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 SLC22A24Q8N4F4 322 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 OR6T1Q8NGN1 323 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 TAS2R5Q9NYW4 299 aa19.95■□□□□ 0.78
COL27A1-208ENST00000494780 LEF1Q9UJU2 399 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF346Q9UL40 294 aaKnown RBP19.95■□□□□ 0.78
COL27A1-208ENST00000494780 ANK2Q01484 3957 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 CH25HO95992 272 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 OPN1SWP03999 348 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 OR8G3PP0DMU2 310 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 MRPS11P82912 194 aaKnown RBP19.94■□□□□ 0.78
COL27A1-208ENST00000494780 MAD2L1BPQ15013 274 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-208ENST00000494780 CYP51A1Q16850 503 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 ENTPD8Q5MY95 495 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 TTC33Q6PID6 262 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-208ENST00000494780 GLCCI1Q86VQ1 547 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 GPR32P1Q8NGA4 272 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 FGFBP3Q8TAT2 258 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF566Q969W8 418 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 SLC25A44Q96H78 314 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-208ENST00000494780 RACGAP1Q9H0H5 632 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF385DQ9H6B1 395 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 MYEF2Q9P2K5 600 aaKnown RBP19.94■□□□□ 0.78
COL27A1-208ENST00000494780 DUSP13Q9UII6 198 aa19.94■□□□□ 0.78
COL27A1-208ENST00000494780 CPSF4LA6NMK7 179 aaKnown RBP19.93■□□□□ 0.78
COL27A1-208ENST00000494780 PATE4P0C8F1 98 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 TMEM33P57088 247 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 LRFN4Q6PJG9 635 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 RINLQ6ZS11 566 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 DHDDSQ86SQ9 333 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 SLC30A8Q8IWU4 369 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 DPP10Q8N608 796 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 CLDND2Q8NHS1 167 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 MPP4Q96JB8 637 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 NANSQ9NR45 359 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 TMEM38BQ9NVV0 291 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 METRNQ9UJH8 293 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF229Q9UJW7 825 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 FZR1Q9UM11 496 aa19.93■□□□□ 0.78
COL27A1-208ENST00000494780 A0A1W2PPW3 197 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 SLC22A23A1A5C7 686 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 DHHO43323 396 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 RNF13O43567 381 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 LYPD3O95274 346 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 FARS2O95363 451 aaKnown RBP19.92■□□□□ 0.78
COL27A1-208ENST00000494780 TFP02787 698 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 THY1P04216 161 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 SAGP10523 405 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-208ENST00000494780 ITGA2P17301 1181 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 RGS7BPQ6MZT1 257 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-208ENST00000494780 DPPA2Q7Z7J5 298 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 PATL1Q86TB9 770 aaKnown RBP19.92■□□□□ 0.78
COL27A1-208ENST00000494780 CARM1Q86X55 608 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 ADAMTS16Q8TE57 1224 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 CGREF1Q99674 301 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 SLC19A3Q9BZV2 496 aa19.92■□□□□ 0.78
COL27A1-208ENST00000494780 ZNF275Q9NSD4 429 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms