RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PIGFQ07326 219 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 DNM1P46Q6ZS02 220 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 OR4F15Q8NGB8 312 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 NANOS1Q8WY41 292 aaKnown RBP28.83■■■□□ 2.21
CBX4-203ENST00000494546 B3GNT2Q9NY97 397 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 A0A1W2PRG6 482 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 PIP5K1CO60331 668 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 SNX3O60493 162 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 IGF2P01344 180 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 IFNW1P05000 195 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 SERPINF1P36955 418 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 AQP2P41181 271 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 GSG1Q2KHT4 349 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 MST1LQ2TV78 715 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 KCTD14Q9BQ13 255 aaPredicted RBP28.82■■■□□ 2.2
CBX4-203ENST00000494546 NOX3Q9HBY0 568 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 RHCGQ9UBD6 479 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 SNX13Q9Y5W8 968 aa28.82■■■□□ 2.2
CBX4-203ENST00000494546 IGHV2OR16-5A0A0B4J2B6 119 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 MCIDASD6RGH6 385 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 NDUFAB1O14561 156 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 SERPINA1P01009 418 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 PSME3P61289 254 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 HGFACQ04756 655 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 SWI5Q1ZZU3 235 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 FKBP9P1Q75LS8 142 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 CBLL1Q75N03 491 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 INIPQ9NRY2 104 aa28.81■■■□□ 2.2
CBX4-203ENST00000494546 GMNCA6NCL1 334 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 J3KTA2 159 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 IGHG1P01857 330 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 OR4A8P0C604 315 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 PGA4P0DJD7 388 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 PGA3P0DJD8 388 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 GYS2P54840 703 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 CLRN1P58418 232 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 SNRPD2P62316 118 aaKnown RBP28.8■■■□□ 2.2
CBX4-203ENST00000494546 IFI44LQ53G44 452 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 LRFN4Q6PJG9 635 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 MOSPD2Q8NHP6 518 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 GEMIN6Q8WXD5 167 aaKnown RBP28.8■■■□□ 2.2
CBX4-203ENST00000494546 FAM162AQ96A26 154 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 RHNO1Q9BSD3 238 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 FNDC11Q9BVV2 318 aa28.8■■■□□ 2.2
CBX4-203ENST00000494546 NCK1P16333 377 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 FUT4P22083 530 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 PRDX6P30041 224 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 PTDSS1P48651 473 aaKnown RBP28.79■■■□□ 2.2
CBX4-203ENST00000494546 ADIPOQQ15848 244 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 CLEC2AQ6UVW9 174 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 NUP37Q8NFH4 326 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 IL17RDQ8NFM7 739 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 LIPHQ8WWY8 451 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 MS4A3Q96HJ5 214 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 HSH2DQ96JZ2 352 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 ZNF224Q9NZL3 707 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 ABCD2Q9UBJ2 740 aa28.79■■■□□ 2.2
CBX4-203ENST00000494546 QDPRP09417 244 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 IFI30P13284 250 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 GIPRP48546 466 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 LSM11P83369 360 aaKnown RBP eCLIP28.78■■■□□ 2.21e-6■■■■■ 28.9
CBX4-203ENST00000494546 RUNX1T1Q06455 604 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 PIWIL3Q7Z3Z3 882 aaKnown RBP28.78■■■□□ 2.2
CBX4-203ENST00000494546 OFCC1Q8IZS5 231 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 BPIFA2Q96DR5 249 aa28.78■■■□□ 2.2
CBX4-203ENST00000494546 IGHV4-30-2A0A087WSY4 118 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 DHHO43323 396 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 RAB36O95755 333 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 DAP3P51398 398 aaKnown RBP28.77■■■□□ 2.2
CBX4-203ENST00000494546 RAB1AP62820 205 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 GNGT1P63211 74 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 LAPTM4AQ15012 233 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 SKA3Q8IX90 412 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 SLC22A24Q8N4F4 322 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 ZNF525Q8N782 197 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 ASB10Q8WXI3 467 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 ZNF347Q96SE7 839 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 SPAG4Q9NPE6 437 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 TMEM38BQ9NVV0 291 aa28.77■■■□□ 2.2
CBX4-203ENST00000494546 B9A039 149 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 PDE5AO76074 875 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 UBL3O95164 117 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 THBS4P35443 961 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 EFNA4P52798 201 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 DSCR9P59020 149 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 MYBPC1Q00872 1141 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 TRAM2Q15035 370 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 KRT80Q6KB66 452 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 HDDC2Q7Z4H3 204 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 SYT14Q8NB59 555 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 NOXO1Q8NFA2 376 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 MAN2C1Q9NTJ4 1040 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 ADA2Q9NZK5 511 aa28.76■■■□□ 2.19
CBX4-203ENST00000494546 NIPBLQ6KC79 2804 aaeCLIP28.76■■■□□ 2.19
CBX4-203ENST00000494546 VSTM5A8MXK1 200 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 FFAR1O14842 300 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 LY6HO94772 140 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 PATE4P0C8F1 98 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 OR8G3PP0DMU2 310 aa28.75■■■□□ 2.19
CBX4-203ENST00000494546 ACADSP16219 412 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms