RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 OR2T1O43869 369 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 CLIC3O95833 236 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 LGI1O95970 557 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
ERCC3-209ENST00000494464 CDH12P55289 794 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 SMIM11AP58511 58 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 GABRA6Q16445 453 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 MICAQ29983 383 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 Q5PR19 223 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 TMEM225Q6GV28 225 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 PRSS57Q6UWY2 283 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 CREB3L2Q70SY1 520 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 GPAT4Q86UL3 456 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 RANBP3LQ86VV4 465 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-209ENST00000494464 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 SETD9Q8NE22 299 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 LILRB1Q8NHL6 650 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-209ENST00000494464 FBLIM1Q8WUP2 373 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 TMEM171Q8WVE6 324 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 SLC38A4Q969I6 547 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 FBXW5Q969U6 566 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 MUS81Q96NY9 551 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 ARHGDIGQ99819 225 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 NPAP1Q9NZP6 1156 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 NDUFA13Q9P0J0 144 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 SLC25A15Q9Y619 301 aa11.59□□□□□ -0.55
ERCC3-209ENST00000494464 FLNAP21333 2647 aaKnown RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 IGKV1D-42A0A075B6H8 117 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 A0A087WXM4 84 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 SMIM31A0A1B0GVY4 71 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 FMO6PO60774 539 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 GADD45GO95257 159 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 TFAP2AP05549 437 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 GTF2E2P29084 291 aaKnown RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 MPGP29372 298 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 RPS5P46782 204 aaKnown RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 FOXG1P55316 489 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 TGFBR3Q03167 851 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF672Q499Z4 452 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 RBM48Q5RL73 367 aaKnown RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 AAED1Q7RTV5 226 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 ABHD12BQ7Z5M8 362 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 P3H2Q8IVL5 708 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 KBTBD8Q8NFY9 601 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 OR6S1Q8NH40 331 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 HDAC2Q92769 488 aaKnown RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 KTI12Q96EK9 354 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 BOD1Q96IK1 185 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 CXorf56Q9H5V9 222 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 TMEM27Q9HBJ8 222 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF701Q9NV72 531 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-209ENST00000494464 RCE1Q9Y256 329 aa11.58□□□□□ -0.56
ERCC3-209ENST00000494464 TRAV36DV7A0A075B6V5 113 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 A0A087WUJ7 227 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 OR6C65A6NJZ3 312 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 J3KTA2 159 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 FFAR1O14842 300 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 TPST2O60704 377 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-209ENST00000494464 CCNB2O95067 398 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 DANCRP0C864 163 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 CBLP22681 906 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 PTH2RP49190 550 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 GABARAPL2P60520 117 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-209ENST00000494464 MFSD13AQ14CX5 517 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 OR1Q1Q15612 314 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF613Q6PF04 617 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 KLHL17Q6TDP4 642 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 TMEM108Q6UXF1 575 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 PARP8Q8N3A8 854 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 OR4D11Q8NGI4 311 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 OR52N5Q8NH56 324 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 ADAMTS16Q8TE57 1224 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF566Q969W8 418 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 SLC25A36Q96CQ1 311 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 PERPQ96FX8 193 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 RADILQ96JH8 1075 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 WFDC6Q9BQY6 131 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 TMEM43Q9BTV4 400 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 PAPOLBQ9NRJ5 636 aaKnown RBP11.57□□□□□ -0.56
ERCC3-209ENST00000494464 SELENONQ9NZV5 590 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 NDRG4Q9ULP0 352 aaKnown RBP11.57□□□□□ -0.56
ERCC3-209ENST00000494464 MGAT4BQ9UQ53 548 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 B3GALT5Q9Y2C3 310 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 AMDHD2Q9Y303 409 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 MAP1AP78559 2803 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-209ENST00000494464 ROS1P08922 2347 aa11.57□□□□□ -0.56
ERCC3-209ENST00000494464 LOC102725191A0A1B0GVB3 256 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms