RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DNASE1L1P49184 302 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TGM4P49221 684 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 DAP3P51398 398 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 TAS2R43P59537 309 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RAC3P60763 192 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 VBP1P61758 197 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 NCS1P62166 190 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 HSF1Q00613 529 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ROM1Q03395 351 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TLE3Q04726 772 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 C19orf57Q0VDD7 668 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 CLN3Q13286 438 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 OR1C1Q15619 314 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 HSPB2Q16082 182 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 BCL2A1Q16548 175 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 KCNMB1Q16558 191 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TBC1D25Q3MII6 688 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TMEM176BQ3YBM2 270 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 KLHL12Q53G59 568 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SPINK14Q6IE38 97 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SLC25A25Q6KCM7 469 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 FDX2Q6P4F2 183 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 UNQ9370/PRO34162Q6UXP9 181 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TMEM91Q6ZNR0 172 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 USP43Q70EL4 1123 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SLC35D2Q76EJ3 337 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RHOUQ7L0Q8 258 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TRILQ7L0X0 811 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 VASH1Q7L8A9 365 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 SHFQ7M4L6 423 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SSX6Q7RTT6 188 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 GGNQ86UU5 652 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 JAZF1Q86VZ6 243 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SULF2Q8IWU5 870 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 CLEC1AQ8NC01 280 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 FAM83FQ8NEG4 500 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 OR2M7Q8NG81 312 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 OR9Q1Q8NGQ5 310 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 NDNFQ8TB73 568 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TBC1D15Q8TC07 691 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SPRYD4Q8WW59 207 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 ZMYND19Q96E35 227 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 DTNBP1Q96EV8 351 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TRMT61AQ96FX7 289 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 PGLYRP3Q96LB9 341 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 TSSK2Q96PF2 358 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 MYCBPQ99417 103 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 UTP23Q9BRU9 249 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 CENPOQ9BU64 300 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ALG8Q9BVK2 526 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 CDADC1Q9BWV3 514 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 ISG20L2Q9H9L3 353 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 ACKR4Q9NPB9 350 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RPRD1BQ9NQG5 326 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 MRPL22Q9NWU5 206 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 CCDC59Q9P031 241 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 ABI3Q9P2A4 366 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ST6GALNAC2Q9UJ37 374 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 COPS3Q9UNS2 423 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RASD1Q9Y272 281 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 CNOT1A5YKK6 2376 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 CUL9Q8IWT3 2517 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 EML6Q6ZMW3 1958 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ALPK2Q86TB3 2170 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 MED13Q9UHV7 2174 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 A0A075B6Q4 140 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 A0A1W2PNR3 127 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 DAPL1A0PJW8 107 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 OR5H15A6NDH6 313 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 GJE1A6NN92 205 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PRR32B1ATL7 298 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 H3BML4 177 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SULT2B1O00204 365 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 NKX2-8O15522 239 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ARHGEF9O43307 516 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 RAMP1O60894 148 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 UPK3AO75631 287 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 CLPXO76031 633 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 AQP8O94778 261 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ZNF432O94892 652 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 AKR7A3O95154 331 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 OR6A2O95222 327 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 APOL3O95236 402 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 AVPP01185 164 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 IL1AP01583 271 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SP1P08047 785 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PGA4P0DJD7 388 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 PGA3P0DJD8 388 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 IFNGR1P15260 489 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 CTLA4P16410 223 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 SLC16A1P53985 500 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 OR12D2P58182 307 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ACTA2P62736 377 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 ACTG2P63267 376 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 CSNK2A1P68400 391 aaPredicted RBP6.06□□□□□ -1.44
MSH5-217ENST00000494458 SIRPAP78324 504 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 EGR3Q06889 387 aa6.06□□□□□ -1.44
MSH5-217ENST00000494458 DBPQ10586 325 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms