RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 BCKDKO14874 412 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 TGM6O95932 706 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 RENP00797 406 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 NPPAP01160 153 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 ANXA5P08758 320 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 HOXD4P09016 255 aaPredicted RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 UBCP0CG48 685 aaKnown RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 TBPP20226 339 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 PRKACBP22694 351 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 DCKP27707 260 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 GCKP35557 465 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 FCHO2Q0JRZ9 810 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 CCDC173Q0VFZ6 552 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 SELENBP1Q13228 472 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 PARP15Q460N3 678 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 NHLRC3Q5JS37 347 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 GPRC6AQ5T6X5 926 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 RUSC1-AS1Q66K80 236 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 OR52W1Q6IF63 320 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 SCARA5Q6ZMJ2 495 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF600Q6ZNG1 722 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 DNM1P46Q6ZS02 220 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 ACOT7LQ6ZUV0 252 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 PLA2G4DQ86XP0 818 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 APOBEC3FQ8IUX4 373 aaKnown RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 APRG1Q8IVJ8 170 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 FAM58AQ8N1B3 248 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 JAGN1Q8N5M9 183 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 TRIML2Q8N7C3 387 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 FBXL13Q8NEE6 735 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 OR2A12Q8NGT7 310 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 LILRB4Q8NHJ6 448 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 VN1R17PQ8TDU5 208 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 OPRPNQ99935 248 aaPredicted RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 TMEM175Q9BSA9 504 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 FOLH1BQ9HBA9 442 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 MYOZ2Q9NPC6 264 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 AGPAT3Q9NRZ7 376 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 OR1A1Q9P1Q5 309 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 UXTQ9UBK9 157 aaPredicted RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 SAR1BQ9Y6B6 198 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 SPATA31E1Q6ZUB1 1445 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 ANKARQ7Z5J8 1434 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 YTHDC2Q9H6S0 1430 aaKnown RBP3.5□□□□□ -1.85
GTF3A-208ENST00000493903 CEP350Q5VT06 3117 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 PEAK1Q9H792 1746 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 GON4LQ3T8J9 2241 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 FANCIQ9NVI1 1328 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 PHRF1Q9P1Y6 1649 aaKnown RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 IGHV3OR16-10A0A075B7F0 116 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 GSTTP1A0A1W2PQM5 241 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 A0A1W2PRD5 423 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 SERPINE3A8MV23 424 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 A8MX80 341 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 K7ERQ8 282 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 M0R3G1 203 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 PSMD11O00231 422 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 EDIL3O43854 480 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF432O94892 652 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 STAMBPO95630 424 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 IGHV2-5P01817 119 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 APOA1P02647 267 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 DCNP07585 359 aaKnown RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 DPEP1P16444 411 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 BCKDHBP21953 392 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 RPL34P49207 117 aaKnown RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 GPX6P59796 221 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 HILS1P60008 231 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ERVK-25P63136 954 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 PGGHGQ32M88 737 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 KLF17Q5JT82 389 aaPredicted RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 SLC22A10Q63ZE4 541 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 OLFML2AQ68BL7 652 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 C11orf71Q6IPW1 123 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF613Q6PF04 617 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 REG3GQ6UW15 175 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 PPP1R27Q86WC6 154 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 LIX1Q8N485 282 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 FTMTQ8N4E7 242 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 TTC29Q8NA56 475 aaPredicted RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 GATSQ8NAP1 163 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 FNDC5Q8NAU1 212 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF248Q8NDW4 579 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 OR1S2Q8NGQ3 325 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ASB9Q96DX5 294 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ZBED3Q96IU2 234 aaPredicted RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 ATP6V1G3Q96LB4 118 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 HSFY1Q96LI6 401 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 OR8B4Q96RC9 309 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 SORT1Q99523 831 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 SLC29A1Q99808 456 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 KCTD14Q9BQ13 255 aaPredicted RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 MRPL45Q9BRJ2 306 aaKnown RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 MCRIP2Q9BUT9 160 aaKnown RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 TMEM59Q9BXS4 323 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 RANBP3Q9H6Z4 567 aaPredicted RBP3.49□□□□□ -1.85
GTF3A-208ENST00000493903 HEXA-AS1Q9H8Q6 139 aa3.49□□□□□ -1.85
GTF3A-208ENST00000493903 PANK3Q9H999 370 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms