RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PEX12O00623 359 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 IFNGP01579 166 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CD74P04233 296 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CTSLP07711 333 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR8G3PP0DMU2 310 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CKBP12277 381 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 REEP5Q00765 189 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 MST1LQ2TV78 715 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ANKRD16Q6P6B7 361 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 BAP18Q8IXM2 172 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR10AC1Q8NH08 325 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ZPLD1Q8TCW7 415 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CYB5D2Q8WUJ1 264 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-210ENST00000493582 SGK3Q96BR1 496 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 GAS2L1Q99501 681 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-210ENST00000493582 MRI1Q9BV20 369 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 TMEM100Q9NV29 134 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ADAM29Q9UKF5 820 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 DNAH14Q0VDD8 3507 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF729A6NN14 1252 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF208O43345 1280 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 FAM157CP0CG43 387 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CERS1P27544 350 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 GABRR2P28476 465 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 Q3ZCU0 254 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 Q499Y3 187 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 PARGQ86W56 976 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF561Q8N587 486 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR7G2Q8NG99 324 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR4E2Q8NGC2 313 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 OR51A4Q8NGJ6 313 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF461Q8TAF7 563 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CASD1Q96PB1 797 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 SEMA6CQ9H3T2 930 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 SAGE1Q9NXZ1 904 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 METTL1Q9UBP6 276 aaKnown RBP10.66□□□□□ -0.7
HDAC4-210ENST00000493582 UPB1Q9UBR1 384 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
HDAC4-210ENST00000493582 SCN3AQ9NY46 2000 aa10.66□□□□□ -0.7
HDAC4-210ENST00000493582 C9JQL5 133 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 WNT11O96014 354 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 DCNP07585 359 aaKnown RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 TPT1P13693 172 aaKnown RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 SSTP61278 116 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 DUSP5Q16690 384 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 GXYLT1Q4G148 440 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 NCMAPQ5T1S8 102 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 ARHGAP40Q5TG30 622 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 ETFBKMTQ8IXQ9 262 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 POMGNT2Q8NAT1 580 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 LMLNQ96KR4 655 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 NECAB3Q96P71 396 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 MICU1Q9BPX6 476 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 ULBP3Q9BZM4 244 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 EGLN1Q9GZT9 426 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 PELI2Q9HAT8 420 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 RPS10P5Q9NQ39 176 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 KCNE5Q9UJ90 142 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 CD1AP06126 327 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 AGAP20933 346 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 HIST1H1TP22492 207 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 POU3F4P49335 361 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 PGDP52209 483 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 TRA2BP62995 288 aaKnown RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 CXADRP78310 365 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 KRBOX4Q5JUW0 171 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 SLC48A1Q6P1K1 146 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 ARHGAP11AQ6P4F7 1023 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 KCTD9Q7L273 389 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 SLC35F3Q8IY50 421 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 PAQR4Q8N4S7 273 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-210ENST00000493582 OR52A5Q9H2C5 316 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 FRRS1LQ9P0K9 344 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 CES1P1Q9UKY3 287 aa10.65□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1B0GV90 55 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 A6NLC8 198 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 MCIDASD6RGH6 385 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 RNASEK-C17orf49H0YIS7 233 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 GRM6O15303 877 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 NGFRP08138 427 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 DAOP14920 347 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF28P17035 718 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 SLC6A6P31641 620 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 DIO1P49895 249 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 METAP1P53582 386 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 OR2B8PP59922 312 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 FHL1Q13642 323 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 MFSD12Q6NUT3 480 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF227Q86WZ6 799 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM25Q86YD3 366 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 C15orf54Q8N8G6 183 aa10.65□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF511Q8NB15 262 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms