RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DOLPP1Q86YN1 238 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 KLHDC8AQ8IYD2 350 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C4orf33Q8N1A6 199 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CYP4Z2PQ8N1L4 340 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CLEC4FQ8N1N0 589 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM251Q8N6I4 163 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ACOT4Q8N9L9 421 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RELL2Q8NC24 303 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CAMKVQ8NCB2 501 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ST6GALNAC3Q8NDV1 305 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR7G3Q8NG95 312 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR4F6Q8NGB9 312 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR10G3Q8NGC4 313 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR4K1Q8NGD4 311 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR6S1Q8NH40 331 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NT5CQ8TCD5 201 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 MCOLN3Q8TDD5 553 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF721Q8TF20 911 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PTPMT1Q8WUK0 201 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PHLDA1Q8WV24 401 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 DCAKDQ8WVC6 231 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PEX13Q92968 403 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PKNOX2Q96KN3 472 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PPP1R36Q96LQ0 422 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 JSRP1Q96MG2 331 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CMTM3Q96MX0 182 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RASL10BQ96S79 203 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PAFAH2Q99487 392 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 LPAR4Q99677 370 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 SMR3AQ99954 134 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TTTY12Q9BZ98 90 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RTN4RQ9BZR6 473 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 DERL2Q9GZP9 239 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CHRNA10Q9GZZ6 450 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR10A4Q9H209 315 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 MED20Q9H944 212 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PROK2Q9HC23 129 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 SYTL2Q9HCH5 934 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CHMP1AQ9HD42 196 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 STMN3Q9NZ72 180 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 FAM215AQ9Y5M1 114 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ANKHD1Q8IWZ3 2542 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 HIVEP1P15822 2718 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 DYSFO75923 2080 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 A0A0A6YYD5 115 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 A0A1W2PQ72 361 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 A8MZ25 164 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 MYO1GB0I1T2 1018 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 H0YIG0 161 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CCDC188H7C350 402 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 K7EPI3 171 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PSMD12O00232 456 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TFECO14948 347 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SCO2O43819 266 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SRPX2O60687 465 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 KERAO60938 352 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SPAG7O75391 227 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 LYPLA1O75608 230 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 STK16O75716 305 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TPPPO94811 219 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TOXO94900 526 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 HSPA4LO95757 839 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PDYNP01213 254 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 KLK1P06870 262 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CHRNGP07510 517 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 IL3P08700 152 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 RPS17P08708 135 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 HIST1H2AGP0C0S8 130 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SFTPCP11686 197 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CD1EP15812 388 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ABOP16442 354 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF24P17028 368 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TNNI3P19429 210 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PTNP21246 168 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NT5EP21589 574 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CPN2P22792 545 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 HTR1EP28566 365 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PPARGP37231 505 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 STARP49675 285 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CASP9P55211 416 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SARNPP82979 210 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PLGLB1Q02325 96 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SLAMF1Q13291 335 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 FAM53BQ14153 422 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ARHGAP19Q14CB8 494 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NDUFA9Q16795 377 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 FAM98BQ52LJ0 330 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 UNC50Q53HI1 259 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CLEC6AQ6EIG7 209 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 H3F3CQ6NXT2 135 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TRIM40Q6P9F5 258 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CYB5D1Q6P9G0 228 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM154Q6P9G4 183 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NPSR1Q6W5P4 371 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ADAMTSL2Q86TH1 951 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 YRDCQ86U90 279 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 GCNT2Q8N0V5 402 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 EID3Q8N140 333 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms