RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 ZDHHC11Q9H8X9 412 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CACNA1BQ00975 2339 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 A0A1W2PNV4 684 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 EFCAB10A6NFE3 127 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 AQP7P3A6NL99 342 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 TFECO14948 347 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 DNPH1O43598 174 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 IGHMP01871 453 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PDGFAP04085 211 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 STSP08842 583 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 GADD45AP24522 165 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CDH11P55287 796 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 RPL27P61353 136 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PMP22Q01453 160 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF91Q05481 1191 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 Q6ZS92 163 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PXKQ7Z7A4 578 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 JAZF1Q86VZ6 243 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 GID4Q8IVV7 300 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 KDM8Q8N371 416 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CYB561A3Q8NBI2 242 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 NMNAT3Q96T66 252 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 NEURL2Q9BR09 285 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 LDAHQ9H6V9 325 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF346Q9UL40 294 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 A3GALT2U3KPV4 340 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 NPIPB13A6NJU9 1138 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 NPIPB4C9JG80 1138 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 H0YC42 278 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 DBTP11182 482 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 LHX2P50458 406 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 P2RY4P51582 365 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 PPP5CP53041 499 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 SUCLG1P53597 346 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 CARD18P57730 90 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 RAC3P60763 192 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 H3F3AP84243 136 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 HSF1Q00613 529 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 POU3F1Q03052 451 aaPredicted RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 KRR1Q13601 381 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ACKR1Q16570 336 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF404Q494X3 552 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 PDSS1Q5T2R2 415 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 HBMQ6B0K9 141 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 TMEM225Q6GV28 225 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 TRILQ7L0X0 811 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF367Q7RTV3 350 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ARIH2OSQ8N7S6 290 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 BBS1Q8NFJ9 593 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 OR2V1Q8NHB1 315 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 PTP4A1Q93096 173 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ABHD17AQ96GS6 310 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 NAA11Q9BSU3 229 aaPredicted RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 DEFB127Q9H1M4 99 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 MED20Q9H944 212 aa12.6□□□□□ -0.39
PDZRN3-210ENST00000492909 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 XKRYO14609 159 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ACTL6AO96019 429 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ITGB2P05107 769 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 PIPP12273 146 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 CD40LGP29965 261 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 CDKN2AP42771 156 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC15A1P46059 708 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 DAP3P51398 398 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ST3GAL4Q11206 333 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 LINC00303Q3SY05 128 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 MESTQ5EB52 335 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 NIPAL3Q6P499 406 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 OR10D3Q8NH80 312 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 ADGRG7Q96K78 797 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 CDCA4Q9BXL8 241 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 EXO5Q9H790 373 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 TIGARQ9NQ88 270 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 B3GAT1Q9P2W7 334 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 NOX1Q9Y5S8 564 aa12.59□□□□□ -0.39
PDZRN3-210ENST00000492909 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 NPIPA5E9PKD4 350 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 K7EM74 188 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 PTHP01270 115 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 FAM87AP0C7U9 286 aa12.58□□□□□ -0.39
PDZRN3-210ENST00000492909 IFNGR1P15260 489 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms