RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TDGF1P3P51864 188 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ACLYP53396 1101 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 SUB1P53999 127 aaKnown RBP eCLIP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 MRPS22P82650 360 aaKnown RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 MECOMQ03112 1051 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TGM3Q08188 693 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 PSG5Q15238 335 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 MPPED2Q15777 294 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 LRRC10Q5BKY1 277 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 KHDRBS2Q5VWX1 349 aaKnown RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 SASS6Q6UVJ0 657 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 C6orf89Q6UWU4 347 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ASCL5Q7RTU5 278 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 LHFPL3Q86UP9 236 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 GTPBP8Q8N3Z3 284 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZADH2Q8N4Q0 377 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 CEP112Q8N8E3 955 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC22A8Q8TCC7 542 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 GPR151Q8TDV0 419 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ELMO1Q92556 727 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 RARRES2Q99969 163 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 VPS37BQ9H9H4 285 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 NUP50Q9UKX7 468 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TRAPPC4Q9Y296 219 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 CACNG2Q9Y698 323 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TRIOBPQ9H2D6 2365 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ARID1AO14497 2285 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNFX1Q9P2E3 1918 aaKnown RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGKV1D-13A0A0B4J2D9 117 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 A0A1B0GUA9 196 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 FAM166BA8MTA8 275 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 C9JVG2 144 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 DNALI1O14645 258 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC31A2O15432 143 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 MGRN1O60291 552 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ERLIN2O94905 339 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 TSPAN13O95857 204 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 AGTP01019 485 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ALDOBP05062 364 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 HOXC4P09017 264 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 GKN3PP0CG01 181 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGKV1-13P0DP09 117 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 TOP1P11387 765 aaKnown RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 FGF8P55075 233 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CDH6P55285 790 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 SH3BGRP55822 239 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 GPX6P59796 221 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 FZD2Q14332 565 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ARHGAP19Q14CB8 494 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 RSPO1Q2MKA7 263 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 VPS26BQ4G0F5 336 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 RAET1LQ5VY80 246 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CARD17Q5XLA6 110 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CYB5R2Q6BCY4 276 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CNIH2Q6PI25 160 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF621Q6ZSS3 439 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 RNF175Q8N4F7 328 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR7G2Q8NG99 324 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR10G9Q8NGN4 311 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR1S2Q8NGQ3 325 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR1N2Q8NGR9 330 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2G2Q8NGZ5 317 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 BLOC1S5Q8TDH9 187 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ACER1Q8TDN7 264 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 PIBF1Q8WXW3 757 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM158Q8WZ71 300 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 KIFAP3Q92845 792 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 STMN2Q93045 179 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CENPKQ9BS16 269 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 RACGAP1Q9H0H5 632 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 CWH43Q9H720 699 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 ANKRA2Q9H9E1 313 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 UGT1A7Q9HAW7 530 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 UGT1A10Q9HAW8 530 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 UGT1A8Q9HAW9 530 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 RAB20Q9NX57 234 aa1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 LSM7Q9UK45 103 aaKnown RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 F11RQ9Y624 299 aaKnown RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 TET2Q6N021 2002 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P30-201ENST00000492455 A0A075B6Q4 140 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 A6NDX4 124 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF726A6NNF4 738 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TRIM49D1C9J1S8 452 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 DLGAP1O14490 977 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 DFNA5O60443 496 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 EIF3GO75821 320 aaKnown RBP eCLIP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGLV2-23P01705 113 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 FGGP02679 453 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 PCCAP05165 728 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 GIPP09681 153 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGHV3-43DP0DP04 118 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 OTX1P32242 354 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 NSG1P42857 185 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 TNNT2P45379 298 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCNHP51946 323 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 UGT2B15P54855 530 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF92Q03936 586 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 GBE1Q04446 702 aa1.8□□□□□ -2.12
HMGB1P30-201ENST00000492455 MADCAM1Q13477 382 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms