RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	CENPVL1	A0A0U1RR11	272 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MED19	A0JLT2	244 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	FITM1	A5D6W6	292 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ANKRD34B	A5PLL1	514 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	FIGNL2	A6NMB9	653 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417		M0R082	166 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	WRB	O00258	174 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	SGCE	O43556	437 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ENTPD6	O75354	484 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ATE1	O95260	518 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	CRYAB	P02511	175 aa	Known RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ZNF16	P17020	682 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ENPP1	P22413	925 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MYF6	P23409	242 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ELAVL4	P26378	380 aa	Known RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	GRK5	P34947	590 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	GNAL	P38405	381 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ZNF84	P51523	738 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	CDH11	P55287	796 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	SLC3A1	Q07837	685 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	FUT7	Q11130	342 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ST3GAL4	Q11206	333 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	HNRNPA0	Q13151	305 aa	Known RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	BTN1A1	Q13410	526 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	C1orf140	Q5VVS0	124 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	PLBD1	Q6P4A8	553 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	GRINA	Q7Z429	371 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	LACC1	Q8IV20	430 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MISP	Q8IVT2	679 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	SULF2	Q8IWU5	870 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	GPALPP1	Q8IXQ4	340 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ARMC10	Q8N2F6	343 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417		Q8N402	240 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	POGLUT1	Q8NBL1	392 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	OR2T33	Q8NG76	320 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ZNF417	Q8TAU3	575 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	TCTEX1D2	Q8WW35	142 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	SLC29A1	Q99808	456 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	CENPO	Q9BU64	300 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	PPA2	Q9H2U2	334 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	TMEM38A	Q9H6F2	299 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	EGLN3	Q9H6Z9	239 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	BIN3	Q9NQY0	253 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	TES	Q9UGI8	421 aa	Known RBP	4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MGAT4A	Q9UM21	535 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	B3GNT3	Q9Y2A9	372 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MSRB2	Q9Y3D2	182 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	FKBP7	Q9Y680	259 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	MED13	Q9UHV7	2174 aa		4.07	□□□□□ -1.76
TRA2B-215	ENST00000492417	DAPL1	A0PJW8	107 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	KDM4E	B2RXH2	506 aa	Predicted RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417		F5H0A9	414 aa	Predicted RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	KIAA0513	O60268	411 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	EIF4E2	O60573	245 aa	Known RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	KLF7	O75840	302 aa	Predicted RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	UPK1B	O75841	260 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	NDUFB2	O95178	105 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	ITGB2	P05107	769 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	RAB40AL	P0C0E4	278 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	HSD11B1	P28845	292 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	PRKAR1B	P31321	381 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	POLR2I	P36954	125 aa	Known RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	EIF1	P41567	113 aa	Known RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	SLC1A3	P43003	542 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	CBX5	P45973	191 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	HTR3A	P46098	478 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	CSNK1A1	P48729	337 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	BID	P55957	195 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	MLF1	P58340	268 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	GUCA2A	Q02747	115 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	RASGEF1B	Q0VAM2	473 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	AADACL4	Q5VUY2	407 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	C3orf33	Q6P1S2	294 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	PIP4P1	Q86T03	277 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	FJX1	Q86VR8	437 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	FTMT	Q8N4E7	242 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	OR8K3	Q8NH51	312 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	NUBPL	Q8TB37	319 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	LRFN5	Q96NI6	719 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	MGLL	Q99685	303 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	CCDC32	Q9BV29	185 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	KATNB1	Q9BVA0	655 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	ANKRD60	Q9BZ19	345 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	ULBP2	Q9BZM5	246 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	OR52D1	Q9H346	318 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	MMP25	Q9NPA2	562 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	INIP	Q9NRY2	104 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	MED17	Q9NVC6	651 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	MED29	Q9NX70	200 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	OSGIN1	Q9UJX0	560 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	FASN	P49327	2511 aa	Known RBP	4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417		A0A075B6Q4	140 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417		A0A1B0GTH9	108 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417	SLC35F4	A4IF30	521 aa		4.06	□□□□□ -1.76
TRA2B-215	ENST00000492417		A8MVM7	634 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms