RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 IFI30P13284 250 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 CBR1P16152 277 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 RUNX1T1Q06455 604 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 NPRL3Q12980 569 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 GLYATQ6IB77 296 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF544Q6NX49 715 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF627Q7L945 461 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 LIPHQ8WWY8 451 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF566Q969W8 418 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 SLC25A44Q96H78 314 aaPredicted RBP21.45■■□□□ 1.02
UPF3A-209ENST00000492270 FOXB1Q99853 325 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 KCNS3Q9BQ31 491 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 KATNB1Q9BVA0 655 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF224Q9NZL3 707 aa21.45■■□□□ 1.02
UPF3A-209ENST00000492270 DYNC1I1O14576 645 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 BCL10O95999 233 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 CRYAAP02489 173 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 MAKP20794 623 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 IFNA8P32881 189 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 ACVR1BP36896 505 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 TRAM2Q15035 370 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 C3orf36Q3SXR2 165 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 LRFN4Q6PJG9 635 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 NRMQ8IXM6 262 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 FAM86B1Q8N7N1 296 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 FAM169BQ8N8A8 192 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 HTRA1Q92743 480 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 BPIFA2Q96DR5 249 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 LRRC37BQ96QE4 947 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 BDH2Q9BUT1 245 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 INIPQ9NRY2 104 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 B3GNT2Q9NY97 397 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 TAGLN3Q9UI15 199 aa21.44■■□□□ 1.02
UPF3A-209ENST00000492270 A0A1W2PRG6 482 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 CD79AP11912 226 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 TCN1P20061 433 aaPredicted RBP21.43■■□□□ 1.02
UPF3A-209ENST00000492270 PAX7P23759 505 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 APOBEC3AP31941 199 aaPredicted RBP21.43■■□□□ 1.02
UPF3A-209ENST00000492270 LAPTM4AQ15012 233 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 CLEC12BQ2HXU8 276 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 Q71RC1 249 aaPredicted RBP21.43■■□□□ 1.02
UPF3A-209ENST00000492270 BIVMQ86UB2 503 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 ASB10Q8WXI3 467 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF347Q96SE7 839 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 RPS6KA6Q9UK32 745 aa21.43■■□□□ 1.02
UPF3A-209ENST00000492270 MCIDASD6RGH6 385 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 DCTN3O75935 186 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 ARR3P36575 388 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 RIPPLY3P57055 190 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 MYBPC1Q00872 1141 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 PIGFQ07326 219 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 TNK1Q13470 666 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 TBPL2Q6SJ96 375 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 CCDC36Q8IYA8 594 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 PGAM4Q8N0Y7 254 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 NOXO1Q8NFA2 376 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 MOV10Q9HCE1 1003 aaKnown RBP21.42■■□□□ 1.02
UPF3A-209ENST00000492270 HIF3AQ9Y2N7 669 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 ENPP4Q9Y6X5 453 aa21.42■■□□□ 1.02
UPF3A-209ENST00000492270 A0A087WUU8 490 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 IGHG1P01857 330 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 QDPRP09417 244 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 MSX2P35548 267 aaPredicted RBP21.41■■□□□ 1.02
UPF3A-209ENST00000492270 CLRN1P58418 232 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 HGFACQ04756 655 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 GSG1Q2KHT4 349 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 VHLLQ6RSH7 139 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 SYT14Q8NB59 555 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 FGFBP3Q8TAT2 258 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 FBXO17Q96EF6 278 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 MS4A3Q96HJ5 214 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF75AQ96N20 296 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 CCT8L2Q96SF2 557 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 MRPL13Q9BYD1 178 aaKnown RBP21.41■■□□□ 1.02
UPF3A-209ENST00000492270 CA10Q9NS85 328 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 DCAF13Q9NV06 445 aaKnown RBP21.41■■□□□ 1.02
UPF3A-209ENST00000492270 V9GYQ6 96 aa21.41■■□□□ 1.02
UPF3A-209ENST00000492270 CHD3Q12873 2000 aaKnown RBP21.4■■□□□ 1.02
UPF3A-209ENST00000492270 TRAV27A0A087WT01 109 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 IGHV2OR16-5A0A0B4J2B6 119 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 DHHO43323 396 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 TRMUO75648 421 aaKnown RBP21.4■■□□□ 1.02
UPF3A-209ENST00000492270 PATE4P0C8F1 98 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 SAGP10523 405 aaPredicted RBP21.4■■□□□ 1.02
UPF3A-209ENST00000492270 PRKCDQ05655 676 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 HIST3H3Q16695 136 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 MST1LQ2TV78 715 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 ALG10Q5BKT4 473 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 ARMC4Q5T2S8 1044 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 ZNF730Q6ZMV8 503 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 IGFN1Q86VF2 1251 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 SKA3Q8IX90 412 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 ACOT11Q8WXI4 607 aaPredicted RBP21.4■■□□□ 1.02
UPF3A-209ENST00000492270 CDRT15Q96T59 188 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 SEPHS2Q99611 448 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 NMNAT1Q9HAN9 279 aaPredicted RBP21.4■■□□□ 1.02
UPF3A-209ENST00000492270 TMEM38BQ9NVV0 291 aa21.4■■□□□ 1.02
UPF3A-209ENST00000492270 NIPBLQ6KC79 2804 aaeCLIP21.39■■□□□ 1.02
UPF3A-209ENST00000492270 hCG_2039718K7EN88 272 aa21.39■■□□□ 1.01
UPF3A-209ENST00000492270 HSD17B1P14061 328 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms