RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	SYNGR3	O43761	229 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	LILRA1	O75019	489 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	SERPINI2	O75830	405 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	RAB36	O95755	333 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	MT-ATP6	P00846	226 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	NPPA	P01160	153 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	C8B	P07358	591 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	B4GALT1	P15291	398 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	PTDSS1	P48651	473 aa	Known RBP	13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	EVX1	P49640	407 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	CDH12	P55289	794 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	RPS23	P62266	143 aa	Known RBP	13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	CAMK2D	Q13557	499 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	UGT2A3	Q6UWM9	527 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	PXK	Q7Z7A4	578 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	CPLX4	Q7Z7G2	160 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	LINC01356	Q8N9X3	169 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	MS4A3	Q96HJ5	214 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	TXNDC15	Q96J42	360 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	SNX18	Q96RF0	628 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	FOXB1	Q99853	325 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	SOX7	Q9BT81	388 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	MYLK2	Q9H1R3	596 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	FBXL3	Q9UKT7	428 aa		13.23	□□□□□ -0.29
MRPL55-231	ENST00000492170	PLPP3	O14495	311 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	MRAS	O14807	208 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	TPST2	O60704	377 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	FMO6P	O60774	539 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	MFN2	O95140	757 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	UBL3	O95164	117 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	OR6A2	O95222	327 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	IGFBP1	P08833	259 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF14	P17017	642 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	CSNK1A1	P48729	337 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	MTPN	P58546	118 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	GALK2	Q01415	458 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	PIGF	Q07326	219 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	RIN1	Q13671	783 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	CYLC2	Q14093	348 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	SELPLG	Q14242	412 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	LIPN	Q5VXI9	398 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF613	Q6PF04	617 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	PIGW	Q7Z7B1	504 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	PTOV1	Q86YD1	416 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	SMYD1	Q8NB12	490 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	C11orf65	Q8NCR3	313 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	OR5J2	Q8NH18	312 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	RP9	Q8TA86	221 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	LRRC58	Q96CX6	371 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	MCHR1	Q99705	422 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	WFDC6	Q9BQY6	131 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	MRPL37	Q9BZE1	423 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	FAM107B	Q9H098	131 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	KAT8	Q9H7Z6	458 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	REV1	Q9UBZ9	1251 aa		13.22	□□□□□ -0.29
MRPL55-231	ENST00000492170	LOC100653049	A0A140TA62	436 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	LRRN3	E7EW58	273 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	C11orf98	E9PRG8	122 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170		M0R3H8	397 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	CHP2	O43745	196 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	ENTPD5	O75356	428 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	KRT34	O76011	436 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	ADORA3	P0DMS8	318 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	ZNF35	P13682	527 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	IL2RG	P31785	369 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	GLRX	P35754	106 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	SRP14	P37108	136 aa	Known RBP	13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	GIPR	P48546	466 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	GZMM	P51124	257 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	CDH15	P55291	814 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	SRSF2	Q01130	221 aa	Known RBP	13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	RBBP4	Q09028	425 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	CYP51A1	Q16850	503 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	MMEL1	Q495T6	779 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	NANOGP8	Q6NSW7	305 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	NHLRC1	Q6VVB1	395 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	TREML1	Q86YW5	311 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	OR8J3	Q8NGG0	315 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	ARHGDIG	Q99819	225 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	MS4A5	Q9H3V2	200 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	NANOG	Q9H9S0	305 aa		13.21	□□□□□ -0.29
MRPL55-231	ENST00000492170	COX4I1	P13073	169 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	PCMT1	P22061	227 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	BID	P55957	195 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	PCBP3	P57721	371 aa	Known RBP	13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	RAB1A	P62820	205 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	CCNI	Q14094	377 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	TRIP10	Q15642	601 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	MSMP	Q1L6U9	139 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	WDFY1	Q8IWB7	410 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	RFLNB	Q8N5W9	214 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	POU5F2	Q8N7G0	328 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	PCYOX1L	Q8NBM8	494 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF75A	Q96N20	296 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	SYT3	Q9BQG1	590 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	GLTP	Q9NZD2	209 aa		13.2	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF224	Q9NZL3	707 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms