RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 DVL2O14641 736 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 SEC16AO15027 2179 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 SNPHO15079 494 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ZNF354AO60765 605 aaPredicted RBP9.69□□□□□ -0.86
USP4-214ENST00000491791 SLC25A12O75746 678 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 AHSA1O95433 338 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 RAF1P04049 648 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 FAM157BP0CG42 384 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 EPXP11678 715 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ELK1P19419 428 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 RAB3BP20337 219 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ITPKBP27987 946 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ACVR1BP36896 505 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 NAA10P41227 235 aaPredicted RBP9.69□□□□□ -0.86
USP4-214ENST00000491791 CCR9P51686 369 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 HCCSP53701 268 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 SCAND1P57086 179 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 RAP1BP61224 184 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 RAP1AP62834 184 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ROM1Q03395 351 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 NTRK2Q16620 822 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 PCK2Q16822 640 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 TEX30Q5JUR7 227 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 NHLRC1Q6VVB1 395 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 DND1Q8IYX4 353 aaKnown RBP9.69□□□□□ -0.86
USP4-214ENST00000491791 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 EID2Q8N6I1 236 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 OR51L1Q8NGJ5 315 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ELP5Q8TE02 316 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ASB17Q8WXJ9 295 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 HTRA1Q92743 480 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 MRGPRX4Q96LA9 322 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 GFM1Q96RP9 751 aaKnown RBP9.69□□□□□ -0.86
USP4-214ENST00000491791 RERGLQ9H628 205 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 TIGARQ9NQ88 270 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 FSCN3Q9NQT6 498 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ACOXLQ9NUZ1 547 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 MYOTQ9UBF9 498 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 MRM2Q9UI43 246 aaKnown RBP9.69□□□□□ -0.86
USP4-214ENST00000491791 B9D1Q9UPM9 204 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 IGLV1-36A0A0B4J1U3 117 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 IGHV3-20A0A0C4DH32 117 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 TTLL8A6PVC2 850 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PRR32B1ATL7 298 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 B4E171 279 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 DCTN6O00399 190 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PDCD5O14737 125 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 CTDSPLO15194 276 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 FLRT2O43155 660 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 NCR1O76036 304 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 CD37P11049 281 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 CD59P13987 128 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 EDNRAP25101 427 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 GRPRP30550 384 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PTGS2P35354 604 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PTGDSP41222 190 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 TSPAN7P41732 249 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 SELENBP1Q13228 472 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 SNTA1Q13424 505 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 ALKBH1Q13686 389 aaKnown RBP9.68□□□□□ -0.86
USP4-214ENST00000491791 ACKR1Q16570 336 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 GXYLT1Q4G148 440 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PYDC2Q56P42 97 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 C1QL3Q5VWW1 255 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PYHIN1Q6K0P9 492 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 RPTNQ6XPR3 784 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 NAXDQ8IW45 347 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 PRSS58Q8IYP2 241 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 Q8N402 240 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 AGBL5Q8NDL9 886 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 OR6K6Q8NGW6 343 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 OTOSQ8NHW6 89 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 SLC22A8Q8TCC7 542 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 SMAP2Q8WU79 429 aaPredicted RBP9.68□□□□□ -0.86
USP4-214ENST00000491791 ZNF700Q9H0M5 742 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 C11orf54Q9H0W9 315 aaPredicted RBP9.68□□□□□ -0.86
USP4-214ENST00000491791 ZNF275Q9NSD4 429 aaPredicted RBP9.68□□□□□ -0.86
USP4-214ENST00000491791 RBFOX1Q9NWB1 397 aaKnown RBP9.68□□□□□ -0.86
USP4-214ENST00000491791 KLHL13Q9P2N7 655 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 GNG8Q9UK08 70 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 RASD1Q9Y272 281 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 WDFY3Q8IZQ1 3526 aa9.68□□□□□ -0.86
USP4-214ENST00000491791 TRBV5-7A0A0A0MS05 114 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 TRBV11-1A0A0K0K1C0 115 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 LOC102725191A0A1B0GVB3 256 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 A0A1W2PNV4 684 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 OR4C45A6NMZ5 311 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 B4DXG7 233 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 MS4A18H0YCH9 400 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 XKRYO14609 159 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 PIN1P1O15428 100 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 F13BP05160 661 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 KRT8P05787 483 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 CD63P08962 238 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 FTH1P19P0C7X4 201 aa9.67□□□□□ -0.86
USP4-214ENST00000491791 SLC2A2P11168 524 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms