RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 C20orf141Q9NUB4 165 aa13.12□□□□□ -0.31
USP39-217ENST00000491659 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
USP39-217ENST00000491659 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
USP39-217ENST00000491659 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
USP39-217ENST00000491659 HTR3EA5X5Y0 456 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 ZNF503-AS2A6NEH8 195 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 SSX4O60224 188 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 RAB36O95755 333 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 LY6G6DO95868 133 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 SERPINA1P01009 418 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 PGA4P0DJD7 388 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 PGA3P0DJD8 388 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 CALCRP30988 508 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 DAP3P51398 398 aaKnown RBP13.11□□□□□ -0.31
USP39-217ENST00000491659 CLRN1P58418 232 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
USP39-217ENST00000491659 GNGT1P63211 74 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 RAB35Q15286 201 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 VHLLQ6RSH7 139 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 FKBP9P1Q75LS8 142 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
USP39-217ENST00000491659 IL17RDQ8NFM7 739 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 HSH2DQ96JZ2 352 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 FNDC11Q9BVV2 318 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 SEC61A2Q9H9S3 476 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 INIPQ9NRY2 104 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
USP39-217ENST00000491659 NF1P21359 2839 aa13.11□□□□□ -0.31
USP39-217ENST00000491659 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 PDE5AO76074 875 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 UBL3O95164 117 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 HLA-HP01893 362 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 F13BP05160 661 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 IFI30P13284 250 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 AQP2P41181 271 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 YAP1P46937 504 aaKnown RBP13.1□□□□□ -0.31
USP39-217ENST00000491659 GABPB1Q06547 395 aaPredicted RBP13.1□□□□□ -0.31
USP39-217ENST00000491659 TRAM2Q15035 370 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 ASB10Q8WXI3 467 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
USP39-217ENST00000491659 RHCGQ9UBD6 479 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 RPS6KA6Q9UK32 745 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
USP39-217ENST00000491659 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 VSTM5A8MXK1 200 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 CENPBD1B2RD01 187 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 B9A039 149 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 J3KTA2 159 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 DHHO43323 396 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 GMNNO75496 209 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
USP39-217ENST00000491659 OR4A8P0C604 315 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
USP39-217ENST00000491659 NCK1P16333 377 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 CR1P17927 2039 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 SERPINF1P36955 418 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 PTDSS1P48651 473 aaKnown RBP13.09□□□□□ -0.31
USP39-217ENST00000491659 GYS2P54840 703 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 DSCR9P59020 149 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 PIGFQ07326 219 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
USP39-217ENST00000491659 CYP4Z1Q86W10 505 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 HTRA1Q92743 480 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 REG4Q9BYZ8 158 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 ZNF442Q9H7R0 627 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 B3GNT2Q9NY97 397 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 ADA2Q9NZK5 511 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
USP39-217ENST00000491659 QDPRP09417 244 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 CSF3P09919 207 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 OR8G3PP0DMU2 310 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 NR2C1P13056 603 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 GIPRP48546 466 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 ZNF84P51523 738 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.32
USP39-217ENST00000491659 DAG1Q14118 895 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 EFNB3Q15768 340 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 ADIPOQQ15848 244 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 ALG10Q5BKT4 473 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 SLC22A24Q8N4F4 322 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 MOSPD2Q8NHP6 518 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 ZNF347Q96SE7 839 aa13.08□□□□□ -0.32
USP39-217ENST00000491659 NOX3Q9HBY0 568 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms