RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NPR2P20594 1047 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 KDELR2P33947 212 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 UGT2B15P54855 530 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 VLDLRP98155 873 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 DEF8Q6ZN54 512 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 HIST3H2AQ7L7L0 130 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 HIPK1Q86Z02 1210 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 SKA3Q8IX90 412 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 PCYOX1LQ8NBM8 494 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 PFN4Q8NHR9 129 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 TMEM255BQ8WV15 326 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 HIST1H2ACQ93077 130 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 SLC25A44Q96H78 314 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-219ENST00000491183 MDFIQ99750 246 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 GID8Q9NWU2 228 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 ARMCX1Q9P291 453 aa15.56■□□□□ 0.08
HMGN1-219ENST00000491183 A8MV72 311 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 FAM220BPB1ANY3 271 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 BLOC1S5-TXNDC5H3BN57 136 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 hCG_2039718K7EN88 272 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PATE4P0C8F1 98 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PGA4P0DJD7 388 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PGA3P0DJD8 388 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 UMPSP11172 480 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 FUT1P19526 365 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 NR4A1P22736 598 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PPOXP50336 477 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PDLIM4P50479 330 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 TAS2R41P59536 307 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 RAB1AP62820 205 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 SNTB2Q13425 540 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 DAG1Q14118 895 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 MSMPQ1L6U9 139 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 CYBRD1Q53TN4 286 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 C6orf52Q5T4I8 152 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 KRT80Q6KB66 452 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 PIWIL3Q7Z3Z3 882 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 SPATA21Q7Z572 469 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 ZCCHC24Q8N2G6 241 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 SVOPLQ8N434 492 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 POU5F2Q8N7G0 328 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 ZNF566Q969W8 418 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 RCN3Q96D15 328 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 FOXN4Q96NZ1 517 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 POLR2J2Q9GZM3 115 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 POLR2J3Q9H1A7 115 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 C20orf141Q9NUB4 165 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 CMTM6Q9NX76 183 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 GMPR2Q9P2T1 348 aaKnown RBP15.55■□□□□ 0.08
HMGN1-219ENST00000491183 FKBP7Q9Y680 259 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 CAPN7Q9Y6W3 813 aa15.55■□□□□ 0.08
HMGN1-219ENST00000491183 VSTM5A8MXK1 200 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 OR7A10O76100 309 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 OR5F1O95221 314 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 USF1P22415 310 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-219ENST00000491183 RBM34P42696 430 aaKnown RBP15.54■□□□□ 0.08
HMGN1-219ENST00000491183 GIPRP48546 466 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 PTDSS1P48651 473 aaKnown RBP15.54■□□□□ 0.08
HMGN1-219ENST00000491183 RUNX1T1Q06455 604 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 RPL18Q07020 188 aaKnown RBP15.54■□□□□ 0.08
HMGN1-219ENST00000491183 LRRC23Q53EV4 343 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-219ENST00000491183 NANOGNBQ7Z5D8 188 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 MICU2Q8IYU8 434 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 SLC22A24Q8N4F4 322 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 OR2T12Q8NG77 320 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 TMEM239Q8WW34 195 aa15.54■□□□□ 0.08
HMGN1-219ENST00000491183 ELOVL7A1L3X0 281 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 SH3PXD2BA1X283 911 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 NDUFS8O00217 210 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 SLC22A2O15244 555 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 DHHO43323 396 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 BCL10O95999 233 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 IGF2P01344 180 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 IFNA14P01570 189 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 F13BP05160 661 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 QDPRP09417 244 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 TSPAN19P0C672 248 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 IGHV4-31P0DP07 118 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 FUT4P22083 530 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 AQP2P41181 271 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 NR4A2P43354 598 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 SELENOWP63302 87 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 LSM11P83369 360 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGN1-219ENST00000491183 RAB39AQ14964 217 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 HIST3H3Q16695 136 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 ZNF584Q8IVC4 421 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 CDK20Q8IZL9 346 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 LIPHQ8WWY8 451 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 SGTBQ96EQ0 304 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 MRPL13Q9BYD1 178 aaKnown RBP15.53■□□□□ 0.08
HMGN1-219ENST00000491183 RAB1BQ9H0U4 201 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 DENND2DQ9H6A0 471 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-219ENST00000491183 TMEM38BQ9NVV0 291 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 A4GNTQ9UNA3 340 aa15.53■□□□□ 0.08
HMGN1-219ENST00000491183 LOC390937A0A1W2PQ73 354 aa15.52■□□□□ 0.08
HMGN1-219ENST00000491183 UBL3O95164 117 aa15.52■□□□□ 0.08
HMGN1-219ENST00000491183 THRBP10828 461 aa15.52■□□□□ 0.08
HMGN1-219ENST00000491183 MDH1P40925 334 aaKnown RBP15.52■□□□□ 0.08
HMGN1-219ENST00000491183 LAPTM4AQ15012 233 aa15.52■□□□□ 0.08
HMGN1-219ENST00000491183 CYB5R2Q6BCY4 276 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms