RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LIPHQ8WWY8 451 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 NRGNQ92686 78 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TAAR8Q969N4 342 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 KTI12Q96EK9 354 aaPredicted RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 MRGPRX4Q96LA9 322 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 MOGAT1Q96PD6 335 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TNFRSF13CQ96RJ3 184 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 PTDSS2Q9BVG9 487 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 OR52D1Q9H346 318 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 RASSF1Q9NS23 344 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TBC1D23Q9NUY8 699 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 IMPAD1Q9NX62 359 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 CAMK2AQ9UQM7 478 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 VDAC3Q9Y277 283 aa6.75□□□□□ -1.33
CLDN1-202ENST00000490800 SF3B6Q9Y3B4 125 aaKnown RBP6.75□□□□□ -1.33
CLDN1-202ENST00000490800 TRAV36DV7A0A075B6V5 113 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 A0A087WZY1 265 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 A8MVM7 634 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SLC1A7O00341 560 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 BHLHE40O14503 412 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 DVL2O14641 736 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PRKYO43930 277 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ZIC3O60481 467 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CTAG2O75638 210 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CBR3O75828 277 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CCDC159P0C7I6 412 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ASAH2BP0C7U1 165 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 HK1P19367 917 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 IL11P20809 199 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TCEA1P23193 301 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CRHBPP24387 322 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 DPP4P27487 766 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TIMP3P35625 211 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 KIR2DL3P43628 341 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PCYT1AP49585 367 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 AGFG1P52594 562 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CXCR4P61073 352 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SNRPGP62308 76 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 RPS4XP62701 263 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 EFNB1P98172 346 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TEKQ02763 1124 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TOP3AQ13472 1001 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 APOFQ13790 326 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 BLMHQ13867 455 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SMN1Q16637 294 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM44Q2T9K0 475 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 RBM48Q5RL73 367 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 C1orf140Q5VVS0 124 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 RPL13AP3Q6NVV1 102 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SLC27A4Q6P1M0 643 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM154Q6P9G4 183 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SMARCD3Q6STE5 483 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CASP12Q6UXS9 341 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SPNS3Q6ZMD2 512 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PTCHD4Q6ZW05 846 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 OAFQ86UD1 273 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PM20D2Q8IYS1 436 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 SLC43A2Q8N370 569 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 GTPBP8Q8N3Z3 284 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 C10orf53Q8N6V4 93 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 RELL2Q8NC24 303 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 FAM83FQ8NEG4 500 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 OR5M1Q8NGP8 315 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TRUB1Q8WWH5 349 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ABTB1Q969K4 478 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF566Q969W8 418 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 WDYHV1Q96HA8 205 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 RCC1LQ96I51 464 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 IL4I1Q96RQ9 567 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TRIB1Q96RU8 372 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 POLDIP3Q9BY77 421 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 OR11A1Q9GZK7 315 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 LIME1Q9H400 295 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PTGES2Q9H7Z7 377 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 FKRPQ9H9S5 495 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 TVP23BQ9NYZ1 205 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PRR13Q9NZ81 148 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF629Q9UEG4 869 aaPredicted RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CHRNA9Q9UGM1 479 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 IL20RAQ9UHF4 553 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF337Q9Y3M9 751 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CCDC168Q8NDH2 2452 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 FREM3P0C091 2139 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 HCFC1P51610 2035 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 PHF3Q92576 2039 aaKnown RBP6.74□□□□□ -1.33
CLDN1-202ENST00000490800 ALPK2Q86TB3 2170 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 CELSR1Q9NYQ6 3014 aa6.74□□□□□ -1.33
CLDN1-202ENST00000490800 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 TRAV20A0A0B4J274 112 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 FTCDNL1E5RQL4 147 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SURF4O15260 269 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF208O43345 1280 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 XPNPEP2O43895 674 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 MPZL2O60487 215 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 NDUFB2O95178 105 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 PPP1R3DO95685 299 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 MT-ATP6P00846 226 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 HMGN1P05114 100 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms