RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MED12Q93074 2177 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 KMT2BQ9UMN6 2715 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 PIEZO2Q9H5I5 2752 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 SH3D21A4FU49 640 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 PRODHO43272 600 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 TLX2O43763 284 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 PRKYO43930 277 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 ZNF432O94892 652 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 IL18BPO95998 194 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 STSP08842 583 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 PGA4P0DJD7 388 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 PGA3P0DJD8 388 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 TMIGD3P0DMS9 266 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 GLI4P10075 376 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CEACAM8P31997 349 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 BLVRAP53004 296 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 ISL1P61371 349 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CSNK2BP67870 215 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 EFNB1P98172 346 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CD47Q08722 323 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 TMED1Q13445 227 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CRMP1Q14194 572 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 MAD2L1BPQ15013 274 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 OCLNQ16625 522 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 MTFR2Q6P444 385 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 CXXC5Q7LFL8 322 aaKnown RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 ABHD12BQ7Z5M8 362 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 CCDC71Q8IV32 467 aaPredicted RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 ENTHD1Q8IYW4 607 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 NPEPL1Q8NDH3 523 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 SDR9C7Q8NEX9 313 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 OR6N1Q8NGY5 312 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 OR2T4Q8NH00 348 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 HDAC2Q92769 488 aaKnown RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 APH1AQ96BI3 265 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
SNX12-205ENST00000490561 LINC00470Q9BZP3 86 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 FKBP7Q9Y680 259 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 ATMQ13315 3056 aa11.75□□□□□ -0.53
SNX12-205ENST00000490561 A0A1B0GUH1 482 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 SLC22A23A1A5C7 686 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 KDM4EB2RXH2 506 aaPredicted RBP11.74□□□□□ -0.53
SNX12-205ENST00000490561 CNOT4O95628 575 aaKnown RBP11.74□□□□□ -0.53
SNX12-205ENST00000490561 GNAO1P09471 354 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 CTSSP25774 331 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 OPRM1P35372 400 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 CDKN2AP42771 156 aaKnown RBP11.74□□□□□ -0.53
SNX12-205ENST00000490561 OR3A2P47893 321 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 SELENOPP49908 381 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 HIST3H3Q16695 136 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 SLC35D3Q5M8T2 416 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 ZNF362Q5T0B9 420 aaPredicted RBP11.74□□□□□ -0.53
SNX12-205ENST00000490561 C20orf196Q8IYI0 205 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 GPR137CQ8N3F9 429 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 MARVELD2Q8N4S9 558 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 FBLIM1Q8WUP2 373 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 IL4I1Q96RQ9 567 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 NMNAT3Q96T66 252 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 DDOQ99489 341 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 EMC6Q9BV81 110 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 NMNAT2Q9BZQ4 307 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 RACGAP1Q9H0H5 632 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 SLCO5A1Q9H2Y9 848 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 ZNF226Q9NYT6 803 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 GLTPQ9NZD2 209 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 FOXD3Q9UJU5 478 aaPredicted RBP11.74□□□□□ -0.53
SNX12-205ENST00000490561 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX12-205ENST00000490561 CLEC4AQ9UMR7 237 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 LRCH1Q9Y2L9 728 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 ITPR1Q14643 2758 aa11.74□□□□□ -0.53
SNX12-205ENST00000490561 OR6C68A6NDL8 312 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 SLC22A31A6NKX4 558 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 KHDRBS3O75525 346 aaKnown RBP11.73□□□□□ -0.53
SNX12-205ENST00000490561 KRT33AO76009 404 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 SLC2A10O95528 541 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 CLIC3O95833 236 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 GABRB1P18505 474 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 ZNF84P51523 738 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 ZNF133P52736 654 aaPredicted RBP11.73□□□□□ -0.53
SNX12-205ENST00000490561 CXCR4P61073 352 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 TLE1Q04724 770 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 PLBD1Q6P4A8 553 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 SEM1Q6ZVN7 128 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 ZBTB46Q86UZ6 589 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
SNX12-205ENST00000490561 SYT14Q8NB59 555 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms