RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PCCBP05166 539 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 S100A6P06703 90 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MELTFP08582 738 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CD3GP09693 182 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 UCHL1P09936 223 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ANKRD34CP0C6C1 535 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CISD3P0C7P0 127 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 UBBP0CG47 229 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 UBCP0CG48 685 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ACP5P13686 325 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 FOLR2P14207 255 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MGMTP16455 207 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ATF1P18846 271 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 BCKDHBP21953 392 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 NFYAP23511 347 aaPredicted RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MST1P26927 711 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MPGP29372 298 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 IFNGR2P38484 337 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OMPP47874 163 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SLC11A2P49281 568 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CCR6P51684 374 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 GPR143P51810 404 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CASP6P55212 293 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 DLX5P56178 289 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CLDN6P56747 220 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CLDN2P57739 230 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 RAB1AP62820 205 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 RPS27AP62979 156 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 UBA52P62987 128 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 HSD11B2P80365 405 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MRPS10P82664 201 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 BCL2L1Q07817 233 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SNTB2Q13425 540 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 FGL2Q14314 439 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZNF345Q14585 488 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MAPK14Q16539 360 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 GUCA2BQ16661 112 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 DECR1Q16698 335 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 PGGHGQ32M88 737 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZNF791Q3KP31 576 aaPredicted RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZNF805Q5CZA5 627 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TMEM255AQ5JRV8 349 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 UBE2NLQ5JXB2 153 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CDC73Q6P1J9 531 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MED27Q6P2C8 311 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 NIPAL3Q6P499 406 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 GSG1LQ6UXU4 331 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TMEM64Q6YI46 380 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZNF704Q6ZNC4 412 aaPredicted RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TMUB2Q71RG4 321 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 PGAP1Q75T13 922 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TRMT11Q7Z4G4 463 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 HSD11B1LQ7Z5J1 315 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ADCK2Q7Z695 626 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TECPR1Q7Z6L1 1165 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ADIPOR2Q86V24 386 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 IQCHQ86VS3 1027 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 PAQR7Q86WK9 346 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TMEM17Q86X19 198 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 GID4Q8IVV7 300 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 PDZD9Q8IXQ8 264 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 LNX2Q8N448 690 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 RNF175Q8N4F7 328 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ACBD7Q8N6N7 88 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CELF5Q8N6W0 485 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ZFP41Q8N8Y5 198 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OR4D10Q8NGI6 311 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OR4Q3Q8NH05 313 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 BBS10Q8TAM1 723 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TRMT10AQ8TBZ6 339 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SLC2A12Q8TD20 617 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 RPS4Y2Q8TD47 263 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 C16orf78Q8WTQ4 265 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 C2orf15Q8WU43 125 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 PCNPQ8WW12 178 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SPRYD4Q8WW59 207 aaPredicted RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 THAP4Q8WY91 577 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OVCA2Q8WZ82 227 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OR5P2Q8WZ92 322 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 OSTF1Q92882 214 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SMARCD2Q92925 531 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 INTS12Q96CB8 462 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ECHDC3Q96DC8 303 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MARS2Q96GW9 593 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 C10orf90Q96M02 699 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 C12orf66Q96MD2 445 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MTERF1Q99551 399 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 C12orf57Q99622 126 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ARHGDIGQ99819 225 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 VKORC1Q9BQB6 163 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SEC22CQ9BRL7 303 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 EFCAB11Q9BUY7 163 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 TMED9Q9BVK6 235 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 CDCP1Q9H5V8 836 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 ESRP2Q9H6T0 727 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 MVB12BQ9H7P6 319 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 DDX31Q9H8H2 851 aaKnown RBP3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 EVA1AQ9H8M9 152 aa3.13□□□□□ -1.91
CRNKL1-203ENST00000490258 SGK2Q9HBY8 427 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms