RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CCDC22O60826 627 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 LY6HO94772 140 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 OPN1SWP03999 348 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 IFNGR1P15260 489 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 NQO1P15559 274 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF14P17017 642 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 NR4A1P22736 598 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 GIFP27352 417 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 THBS4P35443 961 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 EVX1P49640 407 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 PPOXP50336 477 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF133P52736 654 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 HIST3H3Q16695 136 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 RABL3Q5HYI8 236 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC46A3Q7Z3Q1 461 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 LRRC17Q8N6Y2 441 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 RASSF5Q8WWW0 418 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 HTRA1Q92743 480 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 HPS1Q92902 700 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 FBXO17Q96EF6 278 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 POLR2J2Q9GZM3 115 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 POLR2J3Q9H1A7 115 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 NOX3Q9HBY0 568 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 TMEM160Q9NX00 188 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF229Q9UJW7 825 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 USP22Q9UPT9 525 aa8.41□□□□□ -1.06
TMEM39A-210ENST00000490099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.067e-8■■■■■ 31.3
TMEM39A-210ENST00000490099 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 LOC390937A0A1W2PQ73 354 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 CPSF4LA6NMK7 179 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF726A6NNF4 738 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 BBIP1A8MTZ0 92 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 A8MV72 311 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 LCE2BO14633 110 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC22A2O15244 555 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 CH25HO95992 272 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 HLA-HP01893 362 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 TP53P04637 393 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 THRBP10828 461 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 NPR2P20594 1047 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 USF1P22415 310 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 RBM34P42696 430 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 NR4A2P43354 598 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 IDH3GP51553 393 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 SNRPD2P62316 118 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 CAMK2DQ13557 499 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 FXNQ16595 210 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 NRN1LQ496H8 165 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 C6orf52Q5T4I8 152 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 ERICH5Q6P6B1 374 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 TTC33Q6PID6 262 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC35D2Q76EJ3 337 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 PIWIL3Q7Z3Z3 882 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC25A44Q96H78 314 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 FOXN4Q96NZ1 517 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 KCNS3Q9BQ31 491 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 MYOZ1Q9NP98 299 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 NANSQ9NR45 359 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 GLTPQ9NZD2 209 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 BAG5Q9UL15 447 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC7A7Q9UM01 511 aa8.4□□□□□ -1.06
TMEM39A-210ENST00000490099 STAB1Q9NY15 2570 aa8.4□□□□□ -1.07
TMEM39A-210ENST00000490099 HTR3EA5X5Y0 456 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 NPIPB13A6NJU9 1138 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 VSTM5A8MXK1 200 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 CENPBD1B2RD01 187 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 NPIPB4C9JG80 1138 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 MRASO14807 208 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 MGRN1O60291 552 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 SEC14L2O76054 403 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 OR5F1O95221 314 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 MT-ND1P03886 318 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 SERPINA5P05154 406 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 ADORA3P0DMS8 318 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 AHCYP23526 432 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 KDELR2P33947 212 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 GLRXP35754 106 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 CSNK1A1P48729 337 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 BIDP55957 195 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 GSG1Q2KHT4 349 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 CARD17Q5XLA6 110 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 REP15Q6BDI9 236 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF813Q6ZN06 617 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 CARM1Q86X55 608 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 SNX32Q86XE0 403 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF584Q8IVC4 421 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 SKA3Q8IX90 412 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 C10orf53Q8N6V4 93 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 OR6N1Q8NGY5 312 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 VANGL1Q8TAA9 524 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 LRRC37BQ96QE4 947 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 FOXB1Q99853 325 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms