RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ASAH2BP0C7U1 165 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PATE4P0C8F1 98 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IL2RGP31785 369 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 RAB1AP62820 205 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 RIN1Q13671 783 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FXNQ16595 210 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 VMACQ2NL98 169 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FAM166AQ6J272 317 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NANOGP8Q6NSW7 305 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IL17RELQ6ZVW7 336 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SLC35D2Q76EJ3 337 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PATL1Q86TB9 770 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SKA3Q8IX90 412 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NEU4Q8WWR8 484 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 MRPL24Q96A35 216 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 VIPAS39Q9H9C1 493 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NANOGQ9H9S0 305 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 MEPEQ9NQ76 525 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 GLTPQ9NZD2 209 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LPAR3Q9UBY5 353 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TRIM33Q9UPN9 1127 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ANK2Q01484 3957 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LRP5LA4QPB2 252 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TRAPPC13A5PLN9 417 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LYNX1G3V0Z9 82 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FXYD1O00168 92 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TACSTD2P09758 323 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LYNX1P0DP58 116 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 GIPRP48546 466 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PTDSS1P48651 473 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CSNK1A1P48729 337 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 EVX1P49640 407 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IQCCQ4KMZ1 466 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FAM120AOSQ5T036 256 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 METTL21CQ5VZV1 264 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TTC33Q6PID6 262 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 HDXQ7Z353 690 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LRP11Q86VZ4 500 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CALHM3Q86XJ0 350 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SLC30A8Q8IWU4 369 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF786Q8N393 782 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SHARPINQ9H0F6 387 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NANSQ9NR45 359 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CMAHPQ9Y471 501 aa16.71■□□□□ 0.27
TNFRSF1B-202ENST00000489921 A0A0G2JND7 137 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 VSTM5A8MXK1 200 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 KPNA4O00629 521 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SASH3O75995 380 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 H2AFXP16104 143 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 GLRXP35754 106 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MELKQ14680 651 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RAB39AQ14964 217 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 HIST3H3Q16695 136 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RABL3Q5HYI8 236 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PIWIL3Q7Z3Z3 882 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SLC22A24Q8N4F4 322 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF540Q8NDQ6 660 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TMEM158Q8WZ71 300 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MPP4Q96JB8 637 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SLC19A3Q9BZV2 496 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 DENND2DQ9H6A0 471 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 CHODLQ9H9P2 273 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MYEF2Q9P2K5 600 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 KCNS2Q9ULS6 477 aa16.7■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RNF13O43567 381 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 UBL3O95164 117 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PGA4P0DJD7 388 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PGA3P0DJD8 388 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 THBS2P35442 1172 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RUNX1T1Q06455 604 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TRMT5Q32P41 509 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SNX32Q86XE0 403 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 UBASH3BQ8TF42 649 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SLC25A44Q96H78 314 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SIKE1Q9BRV8 207 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TPK1Q9H3S4 243 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TMEM38BQ9NVV0 291 aa16.69■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SYNGR3O43761 229 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 OR6A2O95222 327 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TGFAP01135 160 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SERPINA5P05154 406 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SEC24CP53992 1094 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TRIP10Q15642 601 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ELFN2Q5R3F8 820 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 INTS11Q5TA45 600 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 NKAIN4Q8IVV8 208 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 PAQR4Q8N4S7 273 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF566Q969W8 418 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 C1orf159Q96HA4 380 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 ZNF583Q96ND8 569 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SEPHS2Q99611 448 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 SH3GL3Q99963 347 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TMEM120AQ9BXJ8 343 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 MRPL13Q9BYD1 178 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 DYNLRB1Q9NP97 96 aa16.68■□□□□ 0.26
TNFRSF1B-202ENST00000489921 DHHO43323 396 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 RAB36O95755 333 aa16.67■□□□□ 0.26
TNFRSF1B-202ENST00000489921 TSPAN19P0C672 248 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms