RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ZNF716A6NP11 495 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 J3QRE1 110 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 CYTIPO60759 359 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 GLCEO94923 617 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 RAB36O95755 333 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 IGHA1P01876 353 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 CRYABP02511 175 aaKnown RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 CLUP10909 449 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 DCKP27707 260 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 GSTT1P30711 240 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 CENPAP49450 140 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 PIGFQ07326 219 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 POU4F2Q12837 409 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 C1DQ13901 141 aaKnown RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 MELKQ14680 651 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 LINC00303Q3SY05 128 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 PLEKHN1Q494U1 663 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 EEF1A1P5Q5VTE0 462 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 CREB3L2Q70SY1 520 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 GPAT4Q86UL3 456 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 OR9K2Q8NGE7 335 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 OR2T4Q8NH00 348 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 FNDC8Q8TC99 324 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 TIMP4Q99727 224 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 MRPL13Q9BYD1 178 aaKnown RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 PRDM14Q9GZV8 571 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 EXO5Q9H790 373 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 VCX3AQ9NNX9 186 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 RPRD1BQ9NQG5 326 aaKnown RBP12.62□□□□□ -0.39
VPS26A-205ENST00000489656 ASB6Q9NWX5 421 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 MED29Q9NX70 200 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 SVILO95425 2214 aa12.62□□□□□ -0.39
VPS26A-205ENST00000489656 IGHV3-15A0A0B4J1V0 119 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 NPIPA2E9PIF3 369 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 NPIPA3F8WFD2 350 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 TRMUO75648 421 aaKnown RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 GYPBP06028 91 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 C21orf33P30042 268 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 BIDP55957 195 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 EMX1Q04741 257 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 PON3Q15166 354 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 GTF2IRD2BQ6EKJ0 949 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 KCTD8Q6ZWB6 473 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 FCRLAQ7L513 359 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 GTF2IRD2Q86UP8 949 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 POMGNT2Q8NAT1 580 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF845Q96IR2 970 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 CCDC90BQ9GZT6 254 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 RACGAP1Q9H0H5 632 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 RNF122Q9H9V4 155 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 EXOSC1Q9Y3B2 195 aaKnown RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 ATMQ13315 3056 aa12.61□□□□□ -0.39
VPS26A-205ENST00000489656 NCOA6Q14686 2063 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-205ENST00000489656 FREM1Q5H8C1 2179 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 IGKV3D-15A0A087WSY6 115 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 IGLV1-36A0A0B4J1U3 117 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 SLC35F4A4IF30 521 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 H7C1C5 153 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
VPS26A-205ENST00000489656 SYNGR4O95473 234 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 IGHG1P01857 330 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 ADRA2AP08913 450 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 SBK2P0C263 348 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 PGA4P0DJD7 388 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 PGA3P0DJD8 388 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 NR2C1P13056 603 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 CRABP1P29762 137 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 BLVRAP53004 296 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
VPS26A-205ENST00000489656 LCN6P62502 163 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 HIST3H3Q16695 136 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 OR6V1Q8N148 313 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 ZIC4Q8N9L1 334 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 NOXO1Q8NFA2 376 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 OR4F15Q8NGB8 312 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 FAR1Q8WVX9 515 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 FCGR1BQ92637 280 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 MUL1Q969V5 352 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms