RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SLC35F4A4IF30 521 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF726A6NNF4 738 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 TNFSF13O75888 250 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 CRHP06850 196 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 SDHAP31040 664 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 SELENOPP49908 381 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 IL5RAQ01344 420 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 GUSBP1Q15486 140 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 MTFR2Q6P444 385 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF100Q8IYN0 542 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 C8orf59Q8N0T1 100 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-209ENST00000489485 TCEANCQ8N8B7 351 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 OR4K13Q8NH42 304 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 SLC38A2Q96QD8 506 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 TXNIPQ9H3M7 391 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 COQ3Q9NZJ6 369 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 SLC5A6Q9Y289 635 aa12.63□□□□□ -0.39
CLDN11-209ENST00000489485 ARPC3O15145 178 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 SURF4O15260 269 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 DENRO43583 198 aaKnown RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 AKAP8O43823 692 aaKnown RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 PRKYO43930 277 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 HMGN1P05114 100 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 OPRM1P35372 400 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 ISL1P61371 349 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 DBPQ10586 325 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 IL18R1Q13478 541 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 MED21Q13503 144 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF362Q5T0B9 420 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 CARD17Q5XLA6 110 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 PTCHD4Q6ZW05 846 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 ENTHD1Q8IYW4 607 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 OR52E2Q8NGJ4 325 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 OR6K3Q8NGY3 331 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 PLEKHA8Q96JA3 519 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF629Q9UEG4 869 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-209ENST00000489485 PCDHGB5Q9Y5G0 923 aa12.62□□□□□ -0.39
CLDN11-209ENST00000489485 DVL2O14641 736 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 IDH3BO43837 385 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 AHCYL1O43865 530 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 IGHV3-9P01782 118 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 APEHP13798 732 aaKnown RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 MYF6P23409 242 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 GRK5P34947 590 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ACVR1BP36896 505 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 PCYT1AP49585 367 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 MESTQ5EB52 335 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 NHLRC1Q6VVB1 395 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 WDFY1Q8IWB7 410 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 DEPDC4Q8N2C3 294 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ARIH2OSQ8N7S6 290 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 SETD9Q8NE22 299 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 TMEM45BQ96B21 275 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 APH1AQ96BI3 265 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ADAD1Q96M93 576 aaKnown RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 NMNAT3Q96T66 252 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 PRRG3Q9BZD7 231 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 CMC2Q9NRP2 79 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF226Q9NYT6 803 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 RCE1Q9Y256 329 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 NCOA6Q14686 2063 aaPredicted RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 NPIPB13A6NJU9 1138 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 FAM183AA6NL82 134 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 RIIAD1A6NNX1 92 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 NPIPB4C9JG80 1138 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 H7C1C5 153 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 XKRYO14609 159 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 IGHMP01871 453 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 EDNRAP25101 427 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 LCN6P62502 163 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 KRR1Q13601 381 aaKnown RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ARMC4Q5T2S8 1044 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 GPR139Q6DWJ6 353 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 KRT80Q6KB66 452 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 HDDC2Q7Z4H3 204 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 BCDIN3DQ7Z5W3 292 aaKnown RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 THAP5Q7Z6K1 395 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 UBE2J2Q8N2K1 259 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 CYB561A3Q8NBI2 242 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms