RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PCMT1P22061 227 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 SLC6A2P23975 617 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 CSNK1A1P48729 337 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 BIDP55957 195 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 RPS23P62266 143 aaKnown RBP10.63□□□□□ -0.71
CPSF3-204ENST00000489403 GALK2Q01415 458 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 SWT1Q5T5J6 900 aaKnown RBP10.63□□□□□ -0.71
CPSF3-204ENST00000489403 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 SMYD1Q8NB12 490 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 HIPK4Q8NE63 616 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 BHLHE22Q8NFJ8 381 aaPredicted RBP10.63□□□□□ -0.71
CPSF3-204ENST00000489403 OR5J2Q8NH18 312 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 TMEM54Q969K7 222 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 EBF4Q9BQW3 602 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 METTL17Q9H7H0 456 aaPredicted RBP10.63□□□□□ -0.71
CPSF3-204ENST00000489403 EVA1AQ9H8M9 152 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 LPAR2Q9HBW0 351 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 SLC7A8Q9UHI5 535 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 SLC13A4Q9UKG4 626 aa10.63□□□□□ -0.71
CPSF3-204ENST00000489403 A0A1W2PPW3 197 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 CHP2O43745 196 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 SERPINB7O75635 380 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 RP2O75695 350 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 MT-ATP6P00846 226 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 TFP02787 698 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 SERPINA5P05154 406 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 MSMBP08118 114 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 ADORA3P0DMS8 318 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 GAAP10253 952 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 NAT2P11245 290 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 IDH3AP50213 366 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 PCBP3P57721 371 aaKnown RBP10.62□□□□□ -0.71
CPSF3-204ENST00000489403 MELKQ14680 651 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 NPTX1Q15818 432 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 ALKBH6Q3KRA9 238 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 REP15Q6BDI9 236 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 LINC00114Q6XXX2 140 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 PIWIL3Q7Z3Z3 882 aaKnown RBP10.62□□□□□ -0.71
CPSF3-204ENST00000489403 ARMC8Q8IUR7 673 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 SLC22A24Q8N4F4 322 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 OR6X1Q8NH79 312 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 C7orf26Q96N11 449 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 MCHR1Q99705 422 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 ARHGDIGQ99819 225 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 CPPED1Q9BRF8 314 aaPredicted RBP10.62□□□□□ -0.71
CPSF3-204ENST00000489403 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 TMBIM4Q9HC24 238 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 GLTPQ9NZD2 209 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.62□□□□□ -0.71
CPSF3-204ENST00000489403 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 FBXL3Q9UKT7 428 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 CORO2BQ9UQ03 480 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 ANGPT4Q9Y264 503 aa10.62□□□□□ -0.71
CPSF3-204ENST00000489403 A0A0A6YYJ9 748 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 CPSF4LA6NMK7 179 aaKnown RBP10.61□□□□□ -0.71
CPSF3-204ENST00000489403 EVPLLA8MZ36 301 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 FMO6PO60774 539 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 CLPTM1O96005 669 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 OPN1SWP03999 348 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 THY1P04216 161 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 MAGEB1P43366 347 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 TMEM33P57088 247 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 LMO4P61968 165 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 MRPS11P82912 194 aaKnown RBP10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZP4Q12836 540 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF74Q16587 644 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 DUSP7Q16829 419 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 RGS7BPQ6MZT1 257 aaPredicted RBP10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF613Q6PF04 617 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 SLC35D2Q76EJ3 337 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 PTOV1Q86YD1 416 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 PAQR4Q8N4S7 273 aaPredicted RBP10.61□□□□□ -0.71
CPSF3-204ENST00000489403 GPR32P1Q8NGA4 272 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 OR6T1Q8NGN1 323 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF566Q969W8 418 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 LRRC37BQ96QE4 947 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 TSPAN32Q96QS1 320 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 SH3GL3Q99963 347 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF385DQ9H6B1 395 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 SLCO1B3Q9NPD5 702 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 TAS2R5Q9NYW4 299 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF346Q9UL40 294 aaKnown RBP10.61□□□□□ -0.71
CPSF3-204ENST00000489403 GRIP1Q9Y3R0 1128 aa10.61□□□□□ -0.71
CPSF3-204ENST00000489403 IGLV3-9A0A075B6K5 115 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 DHHO43323 396 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 PPIHO43447 177 aaKnown RBP10.6□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF500O60304 480 aaPredicted RBP10.6□□□□□ -0.71
CPSF3-204ENST00000489403 OR6A2O95222 327 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 LYPD3O95274 346 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 TGDSO95455 350 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 CH25HO95992 272 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 FAM157BP0CG42 384 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 OR8G3PP0DMU2 310 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 CCL2P13500 99 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms