RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 UGT2B15P54855 530 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 SNTB2Q13425 540 aaKnown RBP19.9■□□□□ 0.78
COL9A3-213ENST00000489045 DAG1Q14118 895 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 LRRC23Q53EV4 343 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-213ENST00000489045 KRT80Q6KB66 452 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 NKAIN4Q8IVV8 208 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 PFN4Q8NHR9 129 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 TMEM255BQ8WV15 326 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF566Q969W8 418 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 ZNF75AQ96N20 296 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 CCDC134Q9H6E4 229 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 GLTPQ9NZD2 209 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 ARMCX1Q9P291 453 aa19.9■□□□□ 0.78
COL9A3-213ENST00000489045 A8MV72 311 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-213ENST00000489045 OR5F1O95221 314 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 IFNA14P01570 189 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 MT-ND1P03886 318 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 OR1E2P47887 323 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 PTDSS1P48651 473 aaKnown RBP19.89■□□□□ 0.77
COL9A3-213ENST00000489045 VLDLRP98155 873 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 C6orf52Q5T4I8 152 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 SPATA21Q7Z572 469 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 SVOPLQ8N434 492 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 RCN3Q96D15 328 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 SLC25A44Q96H78 314 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-213ENST00000489045 PIMREGQ9BSJ6 248 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 POLR2J2Q9GZM3 115 aaKnown RBP19.89■□□□□ 0.77
COL9A3-213ENST00000489045 POLR2J3Q9H1A7 115 aaKnown RBP19.89■□□□□ 0.77
COL9A3-213ENST00000489045 RIMS3Q9UJD0 308 aa19.89■□□□□ 0.77
COL9A3-213ENST00000489045 ATRQ13535 2644 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 VSTM5A8MXK1 200 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 VWC2LB2RUY7 222 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 BLOC1S5-TXNDC5H3BN57 136 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 UBL3O95164 117 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 RAB36O95755 333 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 USF1P22415 310 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-213ENST00000489045 RBM34P42696 430 aaKnown RBP19.88■□□□□ 0.77
COL9A3-213ENST00000489045 GIPRP48546 466 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 RAB1AP62820 205 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 PIN1Q13526 163 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-213ENST00000489045 CARTPTQ16568 116 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 CYBRD1Q53TN4 286 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 POU5F2Q8N7G0 328 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 OR2T12Q8NG77 320 aa19.88■□□□□ 0.77
COL9A3-213ENST00000489045 FBXO9Q9UK97 447 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-213ENST00000489045 RTTNQ86VV8 2226 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 TMEM129A0AVI4 362 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 NDUFS8O00217 210 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 SLC22A2O15244 555 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 BCL10O95999 233 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 PGA4P0DJD7 388 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 PGA3P0DJD8 388 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 NR4A1P22736 598 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 KDELR2P33947 212 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 RPL18Q07020 188 aaKnown RBP19.87■□□□□ 0.77
COL9A3-213ENST00000489045 HSP90B2PQ58FF3 399 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 LRFN4Q6PJG9 635 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 PIWIL3Q7Z3Z3 882 aaKnown RBP19.87■□□□□ 0.77
COL9A3-213ENST00000489045 HIPK1Q86Z02 1210 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 SKA3Q8IX90 412 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 MICU2Q8IYU8 434 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 TMEM239Q8WW34 195 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 SGTBQ96EQ0 304 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 DOK1Q99704 481 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 RAB1BQ9H0U4 201 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 DENND2DQ9H6A0 471 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-213ENST00000489045 MYOZ1Q9NP98 299 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-213ENST00000489045 C20orf141Q9NUB4 165 aa19.87■□□□□ 0.77
COL9A3-213ENST00000489045 MALRD1Q5VYJ5 2156 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 OR7A10O76100 309 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 PATE4P0C8F1 98 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 ZNF35P13682 527 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 FUT1P19526 365 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 GGTLC2Q14390 218 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 CDK20Q8IZL9 346 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 SLC22A24Q8N4F4 322 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 FGFBP3Q8TAT2 258 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 TPD52L3Q96J77 140 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 TMEM38BQ9NVV0 291 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 CMAHPQ9Y471 501 aa19.86■□□□□ 0.77
COL9A3-213ENST00000489045 LOC390937A0A1W2PQ73 354 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 A0A1W2PRG6 482 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 ELOVL7A1L3X0 281 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 SH3PXD2BA1X283 911 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 MCIDASD6RGH6 385 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 DHHO43323 396 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 IGF2P01344 180 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 IGHG1P01857 330 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 F13BP05160 661 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 QDPRP09417 244 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 IGHV4-31P0DP07 118 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 ZNF16P17020 682 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-213ENST00000489045 NR4A2P43354 598 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 CLRN1P58418 232 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 LSM11P83369 360 aaKnown RBP eCLIP19.85■□□□□ 0.779e-8■■□□□ 12.3
COL9A3-213ENST00000489045 RAB39AQ14964 217 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 MSMPQ1L6U9 139 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 ZCCHC24Q8N2G6 241 aaKnown RBP19.85■□□□□ 0.77
COL9A3-213ENST00000489045 FOXN4Q96NZ1 517 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 DYNLRB1Q9NP97 96 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms