RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
PHF1-210ENST00000488767 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
PHF1-210ENST00000488767 PODNL1Q6PEZ8 512 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 ZNF813Q6ZN06 617 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 TSEN54Q7Z6J9 526 aaKnown RBP11.29□□□□□ -0.6
PHF1-210ENST00000488767 ZNF611Q8N823 705 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 OR51A7Q8NH64 312 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
PHF1-210ENST00000488767 SEPHS2Q99611 448 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 FOXC2Q99958 501 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 C1QTNF6Q9BXI9 259 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 MAGIXQ9H6Y5 334 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 ABCA4P78363 2273 aa11.29□□□□□ -0.6
PHF1-210ENST00000488767 TRAV27A0A087WT01 109 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 A6NIZ1 184 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 SMPD2O60906 423 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 KRT36O76013 467 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 DIRAS1O95057 198 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 CRYAAP02489 173 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 ACADSP16219 412 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 MAKP20794 623 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 LOXP28300 417 aaPredicted RBP11.28□□□□□ -0.6
PHF1-210ENST00000488767 ARR3P36575 388 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 GUCA1AP43080 201 aaPredicted RBP11.28□□□□□ -0.6
PHF1-210ENST00000488767 RAP1BP61224 184 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 RAP1AP62834 184 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
PHF1-210ENST00000488767 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 ZBED5Q49AG3 693 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 PGM2L1Q6PCE3 622 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 TBPL2Q6SJ96 375 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
PHF1-210ENST00000488767 FOXB1Q99853 325 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
PHF1-210ENST00000488767 NPAP1Q9NZP6 1156 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 GRHPRQ9UBQ7 328 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 FBXL3Q9UKT7 428 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 CSMD2Q7Z408 3487 aa11.28□□□□□ -0.6
PHF1-210ENST00000488767 XKRYO14609 159 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 ACOT8O14734 319 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 ARHGEF9O43307 516 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 DHHO43323 396 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 OR10H3O60404 316 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 UBL3O95164 117 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 RAB36O95755 333 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 PLAUP00749 431 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 QDPRP09417 244 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 PGA4P0DJD7 388 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 PGA3P0DJD8 388 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 CD79AP11912 226 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 B4GALT1P15291 398 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 CD53P19397 219 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 ATP6V1B2P21281 511 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 RRM2P31350 389 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 MAGEA2P43356 314 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 CTXN1P60606 82 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.61
PHF1-210ENST00000488767 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
PHF1-210ENST00000488767 CD47Q08722 323 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 GK3PQ14409 553 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 C3orf36Q3SXR2 165 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 SEZ6L2Q6UXD5 910 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 DPPA2Q7Z7J5 298 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 SYT14Q8NB59 555 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 KBTBD8Q8NFY9 601 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 GTPBP3Q969Y2 492 aaKnown RBP11.27□□□□□ -0.61
PHF1-210ENST00000488767 SLC38A2Q96QD8 506 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 RBP7Q96R05 134 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 KCNN2Q9H2S1 579 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 DENND2DQ9H6A0 471 aaPredicted RBP11.27□□□□□ -0.61
PHF1-210ENST00000488767 CISD1Q9NZ45 108 aaKnown RBP11.27□□□□□ -0.61
PHF1-210ENST00000488767 ATP23Q9Y6H3 246 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.61
PHF1-210ENST00000488767 OTOGQ6ZRI0 2925 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 TRBV4-1A0A0J9YWV2 114 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 TCRBV5S2A0A599 114 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 SH3PXD2BA1X283 911 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 UNC119BA6NIH7 251 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 AQP12BA6NM10 295 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 VSTM5A8MXK1 200 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 MGRN1O60291 552 aa11.26□□□□□ -0.61
PHF1-210ENST00000488767 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms