RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DAPP51397 102 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 CLRN1P58418 232 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 RAP1BP61224 184 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 RAP1AP62834 184 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 CAMK2DQ13557 499 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 FHL1Q13642 323 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 MELKQ14680 651 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 TRIP10Q15642 601 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 CLEC12AQ5QGZ9 265 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 CARD17Q5XLA6 110 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 FBXW9Q5XUX1 488 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 FAM205BPQ63HN1 556 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 GPR139Q6DWJ6 353 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 KLHL17Q6TDP4 642 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 GPR137CQ8N3F9 429 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 LRRC75AQ8NAA5 344 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 MAGEE2Q8TD90 523 aaPredicted RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 ZNF566Q969W8 418 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 SLC25A44Q96H78 314 aaPredicted RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 LRR1Q96L50 414 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 ZNF570Q96NI8 536 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 ERMAPQ96PL5 475 aaPredicted RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 RBP7Q96R05 134 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 RBM24Q9BX46 236 aaKnown RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 TSSK6Q9BXA6 273 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 GABARAPL1Q9H0R8 117 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 OPN3Q9H1Y3 402 aaPredicted RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 SLCO5A1Q9H2Y9 848 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 EGLN3Q9H6Z9 239 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 IL20Q9NYY1 176 aa9.11□□□□□ -0.95
SKA1-204ENST00000488454 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
SKA1-204ENST00000488454 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 WIPF3A6NGB9 483 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 CENPBD1B2RD01 187 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ARHGEF9O43307 516 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ZNF432O94892 652 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 SOX14O95416 240 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 PPP1R3DO95685 299 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 IGHV3-9P01782 118 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 IGHMP01871 453 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 NR2C1P13056 603 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 ACADSP16219 412 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ZNF26P17031 533 aaPredicted RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 SDHAP31040 664 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 NTF4P34130 210 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 CSNK1A1P48729 337 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ASCL1P50553 236 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ALDH3A2P51648 485 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 RAD23AP54725 363 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ESRRGP62508 458 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 SLC34A1Q06495 639 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 FAPQ12884 760 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 DAG1Q14118 895 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 SLC36A3Q495N2 470 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 TSPO2Q5TGU0 170 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 TFAP2EQ6VUC0 442 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 NHLRC1Q6VVB1 395 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 KIF18BQ86Y91 864 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 C20orf196Q8IYI0 205 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ARIH2OSQ8N7S6 290 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 OR2T33Q8NG76 320 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 FNDC8Q8TC99 324 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ASB10Q8WXI3 467 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 OR2M2Q96R28 347 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 GPX7Q96SL4 187 aaPredicted RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 HDHD5Q9BXW7 423 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 LINC00470Q9BZP3 86 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ENKD1Q9H0I2 346 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 NRIP3Q9NQ35 241 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 C8orf4Q9NR00 106 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 ELOVL5Q9NYP7 299 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 PRSS50Q9UI38 385 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 FOXD3Q9UJU5 478 aaPredicted RBP9.1□□□□□ -0.95
SKA1-204ENST00000488454 BAIAP2Q9UQB8 552 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 MYO7BQ6PIF6 2116 aa9.1□□□□□ -0.95
SKA1-204ENST00000488454 CIB4A0PJX0 185 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 NKX2-6A6NCS4 301 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ZNF587BE7ETH6 402 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 M0R3G1 203 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 SOCS2O14508 198 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 EI24O14681 340 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ARPC3O15145 178 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 AHCYL1O43865 530 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 IFNGP01579 166 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 HMGN1P05114 100 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 IGFBP1P08833 259 aaPredicted RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 COL8A1P27658 744 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 GUCA1AP43080 201 aaPredicted RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 GIPRP48546 466 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 CRISP1P54107 249 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 PPP2R2BQ00005 443 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 MYBPC1Q00872 1141 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 TGFBR3Q03167 851 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 CD47Q08722 323 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms