RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TAS2R16Q9NYV7 291 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 CDH10Q9Y6N8 788 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 POLQO75417 2590 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 CADP27708 2225 aa9.72□□□□□ -0.85
UBE4B-210ENST00000488228 ANKRD17O75179 2603 aaKnown RBP9.71□□□□□ -0.85
UBE4B-210ENST00000488228 AKAP6Q13023 2319 aa9.71□□□□□ -0.85
UBE4B-210ENST00000488228 PLCE1Q9P212 2302 aa9.71□□□□□ -0.85
UBE4B-210ENST00000488228 TEX13CA0A0J9YWL9 993 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 A0A1W2PR80 420 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CIB4A0PJX0 185 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ARRDC5A6NEK1 342 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 NPIPB13A6NJU9 1138 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 OR6C65A6NJZ3 312 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 SAC3D1A6NKF1 404 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 NPIPB4C9JG80 1138 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 SOCS2O14508 198 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 HNRNPRO43390 633 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 TRMUO75648 421 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 THBDP07204 575 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CD14P08571 375 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 FCGR1AP12314 374 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ACADSP16219 412 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 PRKACGP22612 351 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 FASP25445 335 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MPGP29372 298 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 SLC6A6P31641 620 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ACVR1BP36896 505 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 PCYT1AP49585 367 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CLRN1P58418 232 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 RPL27P61353 136 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MYBPC1Q00872 1141 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CD47Q08722 323 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 KRR1Q13601 381 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 GK3PQ14409 553 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MESTQ5EB52 335 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CLEC12AQ5QGZ9 265 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 SHQ1Q6PI26 577 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 FAM122BQ7Z309 247 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 HDDC2Q7Z4H3 204 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 WFDC8Q8IUA0 241 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 LINC00471Q8N535 108 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 STEAP2Q8NFT2 490 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF519Q8TB69 540 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MAGEE2Q8TD90 523 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 HTRA1Q92743 480 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 TMEM54Q969K7 222 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF570Q96NI8 536 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 WFIKKN1Q96NZ8 548 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 GPX7Q96SL4 187 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 DGCR6LQ9BY27 220 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 NELFAQ9H3P2 528 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CRLF2Q9HC73 371 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 TBC1D23Q9NUY8 699 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 KIF17Q9P2E2 1029 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF346Q9UL40 294 aaKnown RBP9.71□□□□□ -0.86
UBE4B-210ENST00000488228 MGAT4BQ9UQ53 548 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 GPR52Q9Y2T5 361 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 APCP25054 2843 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 CACNA1DQ01668 2161 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 TACC2O95359 2948 aa9.71□□□□□ -0.86
UBE4B-210ENST00000488228 HEATR1Q9H583 2144 aaKnown RBP9.7□□□□□ -0.86
UBE4B-210ENST00000488228 ROS1P08922 2347 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 A0A096LPE4 126 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 A0A1W2PPZ6 126 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 IMPA2O14732 288 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 SLC2A10O95528 541 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 TP53P04637 393 aaPredicted RBP9.7□□□□□ -0.86
UBE4B-210ENST00000488228 B4GALT1P15291 398 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 ZNF23P17027 643 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 TUBA1BP68363 451 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 TUBA4AP68366 448 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 ARF1P84077 181 aaKnown RBP9.7□□□□□ -0.86
UBE4B-210ENST00000488228 TAB1Q15750 504 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 GABRA6Q16445 453 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 SLC36A3Q495N2 470 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 FAM205BPQ63HN1 556 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 KLHL17Q6TDP4 642 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 SEZ6L2Q6UXD5 910 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 TUBA1AQ71U36 451 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 ABHD12BQ7Z5M8 362 aaPredicted RBP9.7□□□□□ -0.86
UBE4B-210ENST00000488228 OR52L1Q8NGH7 329 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 OR1K1Q8NGR3 316 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 OR52N5Q8NH56 324 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 OR5K1Q8NHB7 308 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 KCNK17Q96T54 332 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 PKP2Q99959 881 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 IFT27Q9BW83 186 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 MRPL13Q9BYD1 178 aaKnown RBP9.7□□□□□ -0.86
UBE4B-210ENST00000488228 B3GAT2Q9NPZ5 323 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 NRIP3Q9NQ35 241 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 GLTPQ9NZD2 209 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 GRHPRQ9UBQ7 328 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 IER3IP1Q9Y5U9 82 aa9.7□□□□□ -0.86
UBE4B-210ENST00000488228 IGKV1D-43A0A0B4J1Z2 117 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 A6NIZ1 184 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 OR5H1A6NKK0 313 aa9.69□□□□□ -0.86
UBE4B-210ENST00000488228 RPL36A-HNRNPH2H7BZ11 118 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms