RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RAB1BQ9H0U4 201 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 FGFR1OP2Q9NVK5 253 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 GLTPQ9NZD2 209 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 FBXO9Q9UK97 447 aaPredicted RBP16.69■□□□□ 0.26
CD55-209ENST00000488171 IGHV4-61A0A0C4DH41 118 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 VSTM5A8MXK1 200 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 RNF13O43567 381 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 TROVE2P10155 538 aaKnown RBP eCLIP16.68■□□□□ 0.26
CD55-209ENST00000488171 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 PTDSS1P48651 473 aaKnown RBP16.68■□□□□ 0.26
CD55-209ENST00000488171 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.26
CD55-209ENST00000488171 MELKQ14680 651 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 CARTPTQ16568 116 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 LRFN4Q6PJG9 635 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 CARM1Q86X55 608 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 CDK20Q8IZL9 346 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 FGFBP3Q8TAT2 258 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 SLC25A44Q96H78 314 aaPredicted RBP16.68■□□□□ 0.26
CD55-209ENST00000488171 ZNF583Q96ND8 569 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 KCNK17Q96T54 332 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 ECSITQ9BQ95 431 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 SAR1AQ9NR31 198 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 TMEM160Q9NX00 188 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 SH3GLB1Q9Y371 365 aa16.68■□□□□ 0.26
CD55-209ENST00000488171 MRASO14807 208 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 NPPAP01160 153 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 GIPRP48546 466 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 ARFIP2P53365 341 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 RAB1AP62820 205 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 MMEL1Q495T6 779 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 PIWIL3Q7Z3Z3 882 aaKnown RBP16.67■□□□□ 0.26
CD55-209ENST00000488171 SKA3Q8IX90 412 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 ZNF566Q969W8 418 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 DENND2DQ9H6A0 471 aaPredicted RBP16.67■□□□□ 0.26
CD55-209ENST00000488171 MRGBPQ9NV56 204 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 CDC42EP3Q9UKI2 254 aa16.67■□□□□ 0.26
CD55-209ENST00000488171 SH3PXD2BA1X283 911 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 BBIP1A8MTZ0 92 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 SHOX2O60902 331 aaPredicted RBP16.66■□□□□ 0.26
CD55-209ENST00000488171 UBL3O95164 117 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 RAB36O95755 333 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 HIST1H2ABP04908 130 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 PATE4P0C8F1 98 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 PGA4P0DJD7 388 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 PGA3P0DJD8 388 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 UMPSP11172 480 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 GZMKP49863 264 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 UGT2B15P54855 530 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 PODNL1Q6PEZ8 512 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 HIST3H2AQ7L7L0 130 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 ZNF584Q8IVC4 421 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 NKAIN4Q8IVV8 208 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 SLC22A24Q8N4F4 322 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 TMEM255BQ8WV15 326 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 NEU4Q8WWR8 484 aaPredicted RBP16.66■□□□□ 0.26
CD55-209ENST00000488171 HIST1H2ACQ93077 130 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 BPESC1Q9GZL8 116 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 TMEM38BQ9NVV0 291 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 BAG5Q9UL15 447 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 CMAHPQ9Y471 501 aa16.66■□□□□ 0.26
CD55-209ENST00000488171 BLOC1S5-TXNDC5H3BN57 136 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 STAMBPO95630 424 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 IFNA2P01563 188 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 MT-ND1P03886 318 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 ADRA2AP08913 450 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 FAM157CP0CG43 387 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 DAOP14920 347 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 RAB39AQ14964 217 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 ERICH5Q6P6B1 374 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 DEF8Q6ZN54 512 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 NANOGNBQ7Z5D8 188 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 C10orf82Q8WW14 230 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 MRPL24Q96A35 216 aaKnown RBP16.65■□□□□ 0.26
CD55-209ENST00000488171 MRPL37Q9BZE1 423 aaKnown RBP16.65■□□□□ 0.26
CD55-209ENST00000488171 DYNLRB1Q9NP97 96 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 C20orf141Q9NUB4 165 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 RIMS3Q9UJD0 308 aa16.65■□□□□ 0.26
CD55-209ENST00000488171 LOC100653049A0A140TA62 436 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 DHHO43323 396 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 LMX1BO60663 402 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 KRT34O76011 436 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 OR5F1O95221 314 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 BCL10O95999 233 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 OR8G3PP0DMU2 310 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 APEHP13798 732 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 GIFP27352 417 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 GLRXP35754 106 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 RBM34P42696 430 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 OR1E2P47887 323 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 EVX1P49640 407 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 TAS2R41P59536 307 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 RUNX1T1Q06455 604 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 RPL18Q07020 188 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 PIN1Q13526 163 aaPredicted RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 MAPRE2Q15555 327 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 FXNQ16595 210 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 HIST3H3Q16695 136 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 ARIH2OSQ8N7S6 290 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 ZNF540Q8NDQ6 660 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms