RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 IGKV3-15P01624 115 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 IGLV1-44P01699 117 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 FUT4P22083 530 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 CALCRP30988 508 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 ARR3P36575 388 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 CLRN1P58418 232 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 CHRNB3Q05901 458 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 PIGFQ07326 219 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 C3orf36Q3SXR2 165 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 OFCC1Q8IZS5 231 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 RBM15BQ8NDT2 890 aaKnown RBP20.62■□□□□ 0.89
RNF38-208ENST00000488058 MOSPD2Q8NHP6 518 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 NANOS1Q8WY41 292 aaKnown RBP20.62■□□□□ 0.89
RNF38-208ENST00000488058 FBXO17Q96EF6 278 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 BARX1Q9HBU1 254 aaPredicted RBP20.62■□□□□ 0.89
RNF38-208ENST00000488058 INIPQ9NRY2 104 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 ARL2BPQ9Y2Y0 163 aa20.62■□□□□ 0.89
RNF38-208ENST00000488058 PLCE1Q9P212 2302 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 GMNNO75496 209 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 IGF2P01344 180 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 NUDT6P53370 316 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 LSM11P83369 360 aaKnown RBP eCLIP20.61■□□□□ 0.89
RNF38-208ENST00000488058 TRAM2Q15035 370 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 GSG1Q2KHT4 349 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 GLYATQ6IB77 296 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 MEX3DQ86XN8 651 aaKnown RBP20.61■□□□□ 0.89
RNF38-208ENST00000488058 FAM169BQ8N8A8 192 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 RPS6KA6Q9UK32 745 aa20.61■□□□□ 0.89
RNF38-208ENST00000488058 FAM171A2A8MVW0 826 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 LY6G6DO95868 133 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 IGHG1P01857 330 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 PGA4P0DJD7 388 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 PGA3P0DJD8 388 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 BMP4P12644 408 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 MYBPC1Q00872 1141 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 RAB35Q15286 201 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 NRMQ8IXM6 262 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 BPIFA2Q96DR5 249 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 NOX3Q9HBY0 568 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 CA10Q9NS85 328 aa20.6■□□□□ 0.89
RNF38-208ENST00000488058 RNF223E7ERA6 249 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 FFAR1O14842 300 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 DHHO43323 396 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 QDPRP09417 244 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 SAGP10523 405 aaPredicted RBP20.59■□□□□ 0.89
RNF38-208ENST00000488058 TCN1P20061 433 aaPredicted RBP20.59■□□□□ 0.89
RNF38-208ENST00000488058 PTDSS1P48651 473 aaKnown RBP20.59■□□□□ 0.89
RNF38-208ENST00000488058 DAP3P51398 398 aaKnown RBP20.59■□□□□ 0.89
RNF38-208ENST00000488058 RUNX1T1Q06455 604 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 LAPTM4AQ15012 233 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 PIGWQ7Z7B1 504 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 CYP4Z1Q86W10 505 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 SYT14Q8NB59 555 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 FAM156AQ8NDB6 213 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 NOXO1Q8NFA2 376 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 LIPHQ8WWY8 451 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 ASB10Q8WXI3 467 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 LRRC37BQ96QE4 947 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 ZNF347Q96SE7 839 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 MAN2C1Q9NTJ4 1040 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 ARL8BQ9NVJ2 186 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 TAGLN3Q9UI15 199 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 PMF1-BGLAPU3KQ54 211 aa20.59■□□□□ 0.89
RNF38-208ENST00000488058 DCTN3O75935 186 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 RAB36O95755 333 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 MXRA7P84157 204 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 TOP3AQ13472 1001 aaPredicted RBP20.58■□□□□ 0.89
RNF38-208ENST00000488058 LRFN4Q6PJG9 635 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 ZNF730Q6ZMV8 503 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 ZNF627Q7L945 461 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 HDDC2Q7Z4H3 204 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 OR4F15Q8NGB8 312 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 MS4A3Q96HJ5 214 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 B3GNT2Q9NY97 397 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 V9GYQ6 96 aa20.58■□□□□ 0.89
RNF38-208ENST00000488058 VPS13CQ709C8 3753 aa20.58■□□□□ 0.88
RNF38-208ENST00000488058 IGHV2OR16-5A0A0B4J2B6 119 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 TRMUO75648 421 aaKnown RBP20.57■□□□□ 0.88
RNF38-208ENST00000488058 UBL3O95164 117 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 HEXAP06865 529 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 PATE4P0C8F1 98 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 ACADSP16219 412 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 MAKP20794 623 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 SERPINF1P36955 418 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 GIPRP48546 466 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 SNRPD2P62316 118 aaKnown RBP20.57■□□□□ 0.88
RNF38-208ENST00000488058 RAB1AP62820 205 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 HGFACQ04756 655 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 ALG10Q5BKT4 473 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 PIWIL3Q7Z3Z3 882 aaKnown RBP20.57■□□□□ 0.88
RNF38-208ENST00000488058 SKA3Q8IX90 412 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 SLC22A24Q8N4F4 322 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 MAPK1IP1LQ8NDC0 245 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 OR51A7Q8NH64 312 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 ACOT11Q8WXI4 607 aaPredicted RBP20.57■□□□□ 0.88
RNF38-208ENST00000488058 TMEM38BQ9NVV0 291 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 ZNF224Q9NZL3 707 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 HIF3AQ9Y2N7 669 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 ENPP4Q9Y6X5 453 aa20.57■□□□□ 0.88
RNF38-208ENST00000488058 TRAV27A0A087WT01 109 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms