RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 PFN4Q8NHR9 129 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FGFBP3Q8TAT2 258 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TMEM255BQ8WV15 326 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RASSF5Q8WWW0 418 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ZNF583Q96ND8 569 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SEPHS2Q99611 448 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 DOK1Q99704 481 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 VRK1Q99986 396 aaPredicted RBP9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 B3GAT2Q9NPZ5 323 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 NANSQ9NR45 359 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 C20orf141Q9NUB4 165 aa9.68□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FAM220BPB1ANY3 271 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SHOX2O60902 331 aaPredicted RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TSPAN19P0C672 248 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 CD79AP11912 226 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FUT4P22083 530 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 NR4A1P22736 598 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 IGFBP5P24593 272 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GIPRP48546 466 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PTDSS1P48651 473 aaKnown RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RUNX1T1Q06455 604 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RPL18Q07020 188 aaKnown RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PIGFQ07326 219 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 DAG1Q14118 895 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GGTLC2Q14390 218 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FXNQ16595 210 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 HIST3H3Q16695 136 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 NANOGNBQ7Z5D8 188 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 NOXO1Q8NFA2 376 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SLC26A7Q8TE54 656 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 C10orf82Q8WW14 230 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SLC25A44Q96H78 314 aaPredicted RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SOX7Q9BT81 388 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MRPL37Q9BZE1 423 aaKnown RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 BPESC1Q9GZL8 116 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MYOZ1Q9NP98 299 aaPredicted RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TMEM38BQ9NVV0 291 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GLTPQ9NZD2 209 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GMPR2Q9P2T1 348 aaKnown RBP9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 POFUT2Q9Y2G5 429 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SH3GLB1Q9Y371 365 aa9.67□□□□□ -0.86
RAB11FIP3-210ENST00000487899 LOC390937A0A1W2PQ73 354 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ZNF726A6NNF4 738 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RNF13O43567 381 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PIP5K1CO60331 668 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 UBL3O95164 117 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 OR5F1O95221 314 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 NPPAP01160 153 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 IGF2P01344 180 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MT-ND1P03886 318 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PATE4P0C8F1 98 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GIFP27352 417 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RBM34P42696 430 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 OR1E2P47887 323 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ARFIP2P53365 341 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TAS2R41P59536 307 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 LSM11P83369 360 aaKnown RBP eCLIP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 GUCY1A3Q02108 690 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 CYLC2Q14093 348 aaPredicted RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 CHRFAM7AQ494W8 412 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ERICH5Q6P6B1 374 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 LRFN4Q6PJG9 635 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 DEF8Q6ZN54 512 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SPATA21Q7Z572 469 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SKA3Q8IX90 412 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SLC22A24Q8N4F4 322 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PAQR4Q8N4S7 273 aaPredicted RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 IL17RDQ8NFM7 739 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ASB10Q8WXI3 467 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ZNF566Q969W8 418 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MRPL24Q96A35 216 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RCN3Q96D15 328 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MRPL13Q9BYD1 178 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 POLR2J2Q9GZM3 115 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 POLR2J3Q9H1A7 115 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MRGBPQ9NV56 204 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ARMCX1Q9P291 453 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MYEF2Q9P2K5 600 aaKnown RBP9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 BAG5Q9UL15 447 aa9.66□□□□□ -0.86
RAB11FIP3-210ENST00000487899 OR7A10O76100 309 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 OR6A2O95222 327 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RAB36O95755 333 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 F13BP05160 661 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FAM157CP0CG43 387 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 UMPSP11172 480 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 DAOP14920 347 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ZNF23P17027 643 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 FUT1P19526 365 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 IL2RGP31785 369 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 ZNF133P52736 654 aaPredicted RBP9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RAB1AP62820 205 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 PIN1Q13526 163 aaPredicted RBP9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 RAB39AQ14964 217 aa9.65□□□□□ -0.86
RAB11FIP3-210ENST00000487899 MAPRE2Q15555 327 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms