RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PSMA1P25786 263 aaKnown RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 GABRA5P31644 462 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CAPZA2P47755 286 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 HCCSP53701 268 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CDONQ4KMG0 1287 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 AGAP7PQ5VUJ5 663 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CD200R1LQ6Q8B3 271 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 USP43Q70EL4 1123 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SLC16A9Q7RTY1 509 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 KLBQ86Z14 1044 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SYS1Q8N2H4 156 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 ZFAND2BQ8WV99 257 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 DACH2Q96NX9 599 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 AGAP4Q96P64 663 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 HES7Q9BYE0 225 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 DCSTAMPQ9H295 470 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 MED29Q9NX70 200 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 BABAM2Q9NXR7 383 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 PLA2G3Q9NZ20 509 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 B9D1Q9UPM9 204 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 PMF1-BGLAPU3KQ54 211 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 OR5H15A6NDH6 313 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 NME2P1O60361 137 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 RAMP1O60894 148 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 PRKAR1AP10644 381 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 KLK2P20151 261 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 NME2P22392 152 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 CENPAP49450 140 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 OR12D2P58182 307 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ACTA2P62736 377 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 RPS25P62851 125 aaKnown RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ACTG2P63267 376 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TUBA1BP68363 451 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 HSF2Q03933 536 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 MFAP5Q13361 173 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 GPR50Q13585 617 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TBC1D25Q3MII6 688 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF684Q5T5D7 378 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 VASH1Q7L8A9 365 aaPredicted RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 YRDCQ86U90 279 aaKnown RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 CDC20BQ86Y33 519 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 SULF2Q8IWU5 870 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ZFP41Q8N8Y5 198 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 KBTBD8Q8NFY9 601 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 OR14L1PQ8NHC6 308 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 C4orf36Q96KX1 117 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 KLHL15Q96M94 604 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 OXGR1Q96P68 337 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF552Q9H707 407 aaPredicted RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TRIM36Q9NQ86 728 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 SIRT4Q9Y6E7 314 aaPredicted RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 SPTBN2O15020 2390 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ZFHX4Q86UP3 3567 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 A0A0J9YW62 118 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 GJE1A6NN92 205 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 PRR32B1ATL7 298 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 E9PI62 339 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 LRRTM2O43300 516 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 DNPH1O43598 174 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 SLC16A7O60669 478 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 CLPXO76031 633 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 GDF1P27539 372 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 GFRA1P56159 465 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 CDC20Q12834 499 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TOMM20Q15388 145 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 WIPI1Q5MNZ9 446 aaPredicted RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ASB18Q6ZVZ8 466 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 GGNQ86UU5 652 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 UEVLDQ8IX04 471 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 TBC1D15Q8TC07 691 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 DTNBP1Q96EV8 351 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ADGRG7Q96K78 797 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 SLIRPQ9GZT3 109 aaKnown RBP8.44□□□□□ -1.06
SF3B1-211ENST00000487698 KLHDC2Q9Y2U9 406 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 ASPMQ8IZT6 3477 aa8.44□□□□□ -1.06
SF3B1-211ENST00000487698 CACNA1CQ13936 2221 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF407Q9C0G0 2248 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 PNMA8CA0A1B0GUJ8 204 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TRABD2BA6NFA1 517 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TVP23AA6NH52 213 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 A6NL46 340 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF670-ZNF695F2Z2N8 137 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 EIF1BO60739 113 aaKnown RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 GLSO94925 669 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 HPNP05981 417 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 SP1P08047 785 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 PSKH1P11801 424 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 CELP19835 753 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 CRABP1P29762 137 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 FGF9P31371 208 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 PTGS2P35354 604 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 BLVRAP53004 296 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 BIDP55957 195 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms