RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 HOXD1Q9GZZ0 328 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SIRPDQ9H106 197 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 LZTFL1Q9NQ48 299 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 INPP5EQ9NRR6 644 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SERTAD4Q9NUC0 356 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SH3BP4Q9P0V3 963 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 GIMAP2Q9UG22 337 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 IL20RAQ9UHF4 553 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 PCDHGB4Q9UN71 923 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 LRCH1Q9Y2L9 728 aa4.79□□□□□ -1.64
COL4A3-206ENST00000487633 SERTM1A2A2V5 107 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM178BH3BS89 294 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 CHST1O43916 411 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 MFN2O95140 757 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 C6orf47O95873 294 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SERPINA5P05154 406 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 GPIP06744 558 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 GKN3PP0CG01 181 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 LAMP1P11279 417 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 RPS2P15880 293 aaKnown RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 PAX7P23759 505 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 HMOX2P30519 316 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 CCT3P49368 545 aaKnown RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 MMP16P51512 607 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 POLR2HP52434 150 aaKnown RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 ELF3P78545 371 aaPredicted RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 KLRD1Q13241 179 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 FAM83EQ2M2I3 478 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM95Q3KNT9 176 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 MMEL1Q495T6 779 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 FAM209AQ5JX71 171 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 COX20Q5RI15 118 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF678Q5SXM1 525 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SLC27A4Q6P1M0 643 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 METTL2BQ6P1Q9 378 aaKnown RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 FRRS1Q6ZNA5 592 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 RFPL4BQ6ZWI9 263 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF627Q7L945 461 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 C20orf196Q8IYI0 205 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 GPR137CQ8N3F9 429 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SLC30A7Q8NEW0 376 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 OR4S1Q8NGB4 309 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SLC25A40Q8TBP6 338 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 FBXO25Q8TCJ0 367 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 RORBQ92753 470 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SLC25A36Q96CQ1 311 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 OR2J1Q9GZK6 312 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 REEP4Q9H6H4 257 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SMURF1Q9HCE7 757 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 HHATLQ9HCP6 504 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 RLIMQ9NVW2 624 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 NMRK1Q9NWW6 199 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SLCO1C1Q9NYB5 712 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SNX24Q9Y343 169 aa4.78□□□□□ -1.64
COL4A3-206ENST00000487633 SPIN1Q9Y657 262 aaPredicted RBP4.78□□□□□ -1.64
COL4A3-206ENST00000487633 MS4A18H0YCH9 400 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 ANKRD28O15084 1053 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 FBXO24O75426 580 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 TOX4O94842 621 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 SUPT7LO94864 414 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 RAB36O95755 333 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 HSPA4LO95757 839 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 KRT6AP02538 564 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 KRT6BP04259 564 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 F13BP05160 661 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 CD55P08174 381 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 ADH4P08319 380 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 PRG2P13727 222 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 TGFBR2P37173 567 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 MDH2P40926 338 aaKnown RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 ACAA2P42765 397 aaKnown RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 MAGEA12P43365 314 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 KIR2DS4P43632 304 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 RPS5P46782 204 aaKnown RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 KRT6CP48668 564 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 ARF6P62330 175 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 KCNJ10P78508 379 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 TNFAIP6P98066 277 aaPredicted RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 EPS8Q12929 822 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 PMS2P3Q13401 168 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 CAMK2DQ13557 499 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 SMU1Q2TAY7 513 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 MS4A18Q3C1V0 323 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 RFTN2Q52LD8 501 aaPredicted RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 C1orf140Q5VVS0 124 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 LIPMQ5VYY2 423 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 WDR25Q64LD2 544 aaPredicted RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 C10orf99Q6UWK7 81 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 C3orf62Q6ZUJ4 267 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 GPRIN3Q6ZVF9 776 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 EIF3MQ7L2H7 374 aaKnown RBP4.77□□□□□ -1.65
COL4A3-206ENST00000487633 CALHM3Q86XJ0 350 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 NDUFA11Q86Y39 141 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
COL4A3-206ENST00000487633 LRRC8AQ8IWT6 810 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms