RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 AGPAT4Q9NRZ5 378 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 MRPL15Q9P015 296 aaKnown RBP4.91□□□□□ -1.62
COPS3-209ENST00000486810 MARCH4Q9P2E8 410 aaPredicted RBP4.91□□□□□ -1.62
COPS3-209ENST00000486810 STOX2Q9P2F5 926 aaPredicted RBP4.91□□□□□ -1.62
COPS3-209ENST00000486810 FBXL3Q9UKT7 428 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 ANGPT4Q9Y264 503 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 CARHSP1Q9Y2V2 147 aaKnown RBP4.91□□□□□ -1.62
COPS3-209ENST00000486810 LYVE1Q9Y5Y7 322 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 V9GYS6 101 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 SHPRHQ149N8 1683 aa4.91□□□□□ -1.62
COPS3-209ENST00000486810 MARF1Q9Y4F3 1742 aaKnown RBP4.91□□□□□ -1.62
COPS3-209ENST00000486810 ATP10DQ9P241 1426 aa4.9□□□□□ -1.62
COPS3-209ENST00000486810 TRBV5-7A0A0A0MS05 114 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 EDDM13A0A1B0GTR0 161 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SDR42E2A6NKP2 422 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 YDJCA8MPS7 323 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ZNF99A8MXY4 864 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 OR11H12B2RN74 326 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 B4DGG1 531 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 C5orf58C9J3I9 102 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RPL36A-HNRNPH2H7BZ11 118 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 K7EQM0 130 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ZNF749O43361 778 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RGS14O43566 566 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SCGB2A1O75556 95 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RP2O75695 350 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 MT-ND4LP03901 98 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 TK1P04183 234 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 CD5P06127 495 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 HIST1H2AGP0C0S8 130 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 SLC35G4P0C7Q5 338 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 UBCP0CG48 685 aaKnown RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 HOXB2P14652 356 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 HOXB9P17482 250 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 HIST1H2ADP20671 130 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FGF7P21781 194 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 CPT2P23786 658 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ABCD3P28288 659 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 MAGEA12P43365 314 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ARRB1P49407 418 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 BLKP51451 505 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 CLCN3P51790 818 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 MAXP61244 160 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 DEFA5Q01523 94 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 BDH1Q02338 343 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PTP4A2Q12974 167 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RAB31Q13636 194 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RUNX2Q13950 521 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PEA15Q15121 130 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PTGES3Q15185 160 aaKnown RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 RSU1Q15404 277 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SURF2Q15527 256 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 RPE65Q16518 533 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 TAF9Q16594 264 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 LGALSLQ3ZCW2 172 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 SCGB2B2Q4G0G5 96 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 CBWD6Q4V339 395 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 MESTQ5EB52 335 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FNBP1LQ5T0N5 605 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 HIST2H3PS2Q5TEC6 136 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ZNF691Q5VV52 312 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 HIST2H2AA3Q6FI13 130 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FAM71E1Q6IPT2 247 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ZNF774Q6NX45 483 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 KCTD9Q7L273 389 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ANKRD33Q7Z3H0 272 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 TMEM144Q7Z5S9 345 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 TMED4Q7Z7H5 227 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 S100A7AQ86SG5 101 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 CALHM1Q8IU99 346 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PDZD9Q8IXQ8 264 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FBXL13Q8NEE6 735 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FAM71CQ8NEG0 241 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 OR11H1Q8NG94 326 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 OR51L1Q8NGJ5 315 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 OR11H2Q8NH07 326 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FBXO25Q8TCJ0 367 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ASB13Q8WXK3 278 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SMPDL3BQ92485 455 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 LGALS12Q96DT0 336 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 C5orf30Q96GV9 206 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ERGIC2Q96RQ1 377 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 ZNF607Q96SK3 696 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SDHCQ99643 169 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 TBL1XR1Q9BZK7 514 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 RTN4RQ9BZR6 473 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FAM234AQ9H0X4 552 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 FN3KRPQ9HA64 309 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 C3orf14Q9HBI5 128 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 MBNL1Q9NR56 388 aaKnown RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 FBXO6Q9NRD1 293 aaPredicted RBP4.9□□□□□ -1.63
COPS3-209ENST00000486810 P4HTMQ9NXG6 502 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 SCN3BQ9NY72 215 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 USE1Q9NZ43 259 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 UPB1Q9UBR1 384 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 IL17BQ9UHF5 180 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 IKZF3Q9UKT9 509 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PADI1Q9ULC6 663 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 PADI3Q9ULW8 664 aa4.9□□□□□ -1.63
COPS3-209ENST00000486810 KLK4Q9Y5K2 254 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms