RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 OR6C68A6NDL8 312 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 PHYHO14832 338 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 TNFSF14O43557 240 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 PRICKLE3O43900 615 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 GPRIN2O60269 458 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 OR2J2O76002 312 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 HOXB9P17482 250 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 HTR2BP41595 481 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 ALKBH1Q13686 389 aaKnown RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 SF3B4Q15427 424 aaKnown RBP eCLIP12.06□□□□□ -0.482e-7■■■■□ 20.5
HMGN1-216ENST00000486741 APOOLQ6UXV4 268 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 WDR88Q6ZMY6 472 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 DPCDQ9BVM2 203 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 HHLA2Q9UM44 414 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 SLC22A13Q9Y226 551 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 L7N2F9 121 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 SEMA7AO75326 666 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF806P0C7X5 589 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 LCN1P31025 176 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 GDNFP39905 211 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 SCRN3Q0VDG4 424 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 TOMM34Q15785 309 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-216ENST00000486741 Q499Y3 187 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 SIAH3Q8IW03 269 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 OR13C9Q8NGT0 318 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 CCDC86Q9H6F5 360 aaKnown RBP12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF701Q9NV72 531 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-216ENST00000486741 PILRAQ9UKJ1 303 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ARPC4-TTLL3A0A0A6YYG9 625 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ABCD3P28288 659 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 EVI2BP34910 448 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF136P52737 540 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 PRTGQ2VWP7 1150 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 HLA-BQ31612 363 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 NOXA1Q86UR1 476 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ACBD4Q8NC06 268 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 PTP4A1Q93096 173 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 NEURL2Q9BR09 285 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 CGGBP1Q9UFW8 167 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-216ENST00000486741 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 P2RY10O00398 339 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF432O94892 652 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ARSBP15848 533 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 SDHAP31040 664 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 P2RX1P51575 399 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 NXPH1P58417 271 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 DCXRQ7Z4W1 244 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 C15orf40Q8WUR7 153 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 OR2B2Q9GZK3 357 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 WWTR1Q9GZV5 400 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 ABRACLQ9P1F3 81 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 SCP2D1Q9UJQ7 156 aa12.05□□□□□ -0.48
HMGN1-216ENST00000486741 KDM4BO94953 1096 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 WNT1P04628 370 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
HMGN1-216ENST00000486741 PTHLHP12272 177 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 DGCR2P98153 550 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 IFI44Q8TCB0 444 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 ADAMTS14Q8WXS8 1223 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 HMX3A6NHT5 357 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 A6NIZ1 184 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 TCN2P20062 427 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF84P51523 738 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 CLDN17P56750 224 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 RAP1BP61224 184 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 RAP1AP62834 184 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF117Q03924 483 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 TMEM201Q5SNT2 666 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 CCDC190Q86UF4 302 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 CD163Q86VB7 1156 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
HMGN1-216ENST00000486741 PMM1Q92871 262 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF764Q96H86 408 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-216ENST00000486741 VSTM2LQ96N03 204 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 MOKQ9UQ07 419 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 UGT2A1Q9Y4X1 527 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 IGKV1D-16P01601 117 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 DPP4P27487 766 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 RNF4P78317 190 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 SLC22A6Q4U2R8 563 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 SLC22A10Q63ZE4 541 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 CD300LDQ6UXZ3 194 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 LINC00299Q6ZSB3 139 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 DEDD2Q8WXF8 326 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 SRRQ9GZT4 340 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 CHRNA9Q9UGM1 479 aa12.04□□□□□ -0.48
HMGN1-216ENST00000486741 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CENPBD1B2RD01 187 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 MEN1O00255 615 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 IMPA2O14732 288 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 GATBO75879 557 aaKnown RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 SSTR2P30874 369 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms