RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TEX9Q8N6V9 391 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 OR52P1PQ8NH57 321 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 FAM110BQ8TC76 370 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 MAGEE2Q8TD90 523 aaPredicted RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 SDR42E1Q8WUS8 393 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 EMG1Q92979 244 aaKnown RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 SYAP1Q96A49 352 aaPredicted RBP2.6□□□□□ -1.99
LTN1-206ENST00000486427 TSGA13Q96PP4 275 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 MTMR9Q96QG7 549 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 FAIM2Q9BWQ8 316 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 ULBP2Q9BZM5 246 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 RIBC2Q9H4K1 309 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 BFARQ9NZS9 450 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 RFNGQ9Y644 331 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 AP1M2Q9Y6Q5 423 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 KIF16BQ96L93 1317 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 MSH6P52701 1360 aa2.6□□□□□ -1.99
LTN1-206ENST00000486427 C7orf66A4D0T2 115 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 GUCA1CO95843 209 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 GAPDHP04406 335 aaKnown RBP2.59□□□□□ -1.99
LTN1-206ENST00000486427 UBTFL1P0CB47 393 aaPredicted RBP2.59□□□□□ -1.99
LTN1-206ENST00000486427 DESP17661 470 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 TCN1P20061 433 aaPredicted RBP2.59□□□□□ -1.99
LTN1-206ENST00000486427 CCR8P51685 355 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 SUB1P53999 127 aaKnown RBP eCLIP2.59□□□□□ -1.99
LTN1-206ENST00000486427 SCRN3Q0VDG4 424 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 COX19Q49B96 90 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 SLC25A24Q6NUK1 477 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 STRADAQ7RTN6 431 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 NUDCD3Q8IVD9 361 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 UBE2Q2Q8WVN8 375 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 OR10C1Q96KK4 312 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 MS4A4EQ96PG1 132 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 SPNS1Q9H2V7 528 aa2.59□□□□□ -1.99
LTN1-206ENST00000486427 MRPL47Q9HD33 250 aaKnown RBP2.59□□□□□ -1.99
LTN1-206ENST00000486427 K7EQM0 130 aa2.58□□□□□ -2
LTN1-206ENST00000486427 MPZL1O95297 269 aa2.58□□□□□ -2
LTN1-206ENST00000486427 NCK1P16333 377 aa2.58□□□□□ -2
LTN1-206ENST00000486427 RAP1AP62834 184 aa2.58□□□□□ -2
LTN1-206ENST00000486427 SF3A2Q15428 464 aaKnown RBP2.58□□□□□ -2
LTN1-206ENST00000486427 ZNF684Q5T5D7 378 aa2.58□□□□□ -2
LTN1-206ENST00000486427 PRR9Q5T870 116 aa2.58□□□□□ -2
LTN1-206ENST00000486427 HES5Q5TA89 166 aa2.58□□□□□ -2
LTN1-206ENST00000486427 DUX4L9Q6RFH8 374 aaPredicted RBP2.58□□□□□ -2
LTN1-206ENST00000486427 NEGR1Q7Z3B1 354 aa2.58□□□□□ -2
LTN1-206ENST00000486427 BIVMQ86UB2 503 aa2.58□□□□□ -2
LTN1-206ENST00000486427 RIMKLAQ8IXN7 391 aa2.58□□□□□ -2
LTN1-206ENST00000486427 MREGQ8N565 214 aa2.58□□□□□ -2
LTN1-206ENST00000486427 OR2T3Q8NH03 318 aa2.58□□□□□ -2
LTN1-206ENST00000486427 ZNF607Q96SK3 696 aa2.58□□□□□ -2
LTN1-206ENST00000486427 OSBPL11Q9BXB4 747 aa2.58□□□□□ -2
LTN1-206ENST00000486427 LINC00597Q9H2U6 94 aa2.58□□□□□ -2
LTN1-206ENST00000486427 C12orf10Q9HB07 376 aa2.58□□□□□ -2
LTN1-206ENST00000486427 SH3BGRL2Q9UJC5 107 aa2.58□□□□□ -2
LTN1-206ENST00000486427 CABIN1Q9Y6J0 2220 aa2.58□□□□□ -2
LTN1-206ENST00000486427 TET2Q6N021 2002 aaPredicted RBP2.58□□□□□ -2
LTN1-206ENST00000486427 RPL36A-HNRNPH2H7BZ11 118 aa2.57□□□□□ -2
LTN1-206ENST00000486427 NDC80O14777 642 aa2.57□□□□□ -2
LTN1-206ENST00000486427 KMOO15229 486 aa2.57□□□□□ -2
LTN1-206ENST00000486427 VAMP5O95183 116 aa2.57□□□□□ -2
LTN1-206ENST00000486427 LINC00869P0C866 280 aa2.57□□□□□ -2
LTN1-206ENST00000486427 FOLR1P15328 257 aa2.57□□□□□ -2
LTN1-206ENST00000486427 CYB561P49447 251 aa2.57□□□□□ -2
LTN1-206ENST00000486427 ESRRGP62508 458 aa2.57□□□□□ -2
LTN1-206ENST00000486427 PON3Q15166 354 aa2.57□□□□□ -2
LTN1-206ENST00000486427 PRSS8Q16651 343 aa2.57□□□□□ -2
LTN1-206ENST00000486427 DGUOKQ16854 277 aa2.57□□□□□ -2
LTN1-206ENST00000486427 PDZK1Q5T2W1 519 aa2.57□□□□□ -2
LTN1-206ENST00000486427 TRIM40Q6P9F5 258 aa2.57□□□□□ -2
LTN1-206ENST00000486427 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
LTN1-206ENST00000486427 WDR86Q86TI4 376 aa2.57□□□□□ -2
LTN1-206ENST00000486427 ZNF557Q8N988 423 aaPredicted RBP2.57□□□□□ -2
LTN1-206ENST00000486427 GMCL1P1Q8NEA9 526 aa2.57□□□□□ -2
LTN1-206ENST00000486427 THRSPQ92748 146 aa2.57□□□□□ -2
LTN1-206ENST00000486427 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.57□□□□□ -2
LTN1-206ENST00000486427 RBMXL1Q96E39 390 aaKnown RBP2.57□□□□□ -2
LTN1-206ENST00000486427 MED8Q96G25 268 aa2.57□□□□□ -2
LTN1-206ENST00000486427 PARD6BQ9BYG5 372 aa2.57□□□□□ -2
LTN1-206ENST00000486427 DOCK9Q9BZ29 2069 aa2.57□□□□□ -2
LTN1-206ENST00000486427 ATP10AO60312 1499 aa2.57□□□□□ -2
LTN1-206ENST00000486427 HIVEP2P31629 2446 aa2.57□□□□□ -2
LTN1-206ENST00000486427 ZNF726A6NNF4 738 aa2.56□□□□□ -2
LTN1-206ENST00000486427 RBFOX2O43251 390 aaKnown RBP eCLIP2.56□□□□□ -2
LTN1-206ENST00000486427 PTMAP06454 111 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 SLC2A5P22732 501 aa2.56□□□□□ -2
LTN1-206ENST00000486427 RORAP35398 523 aa2.56□□□□□ -2
LTN1-206ENST00000486427 ZNF493Q6ZR52 646 aa2.56□□□□□ -2
LTN1-206ENST00000486427 PUSL1Q8N0Z8 303 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 NEURL3Q96EH8 262 aa2.56□□□□□ -2
LTN1-206ENST00000486427 RBM14Q96PK6 669 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 FOXC2Q99958 501 aa2.56□□□□□ -2
LTN1-206ENST00000486427 OSBPL10Q9BXB5 764 aa2.56□□□□□ -2
LTN1-206ENST00000486427 RMND5AQ9H871 391 aa2.56□□□□□ -2
LTN1-206ENST00000486427 POLE4Q9NR33 117 aa2.56□□□□□ -2
LTN1-206ENST00000486427 ZNRD1Q9P1U0 126 aa2.56□□□□□ -2
LTN1-206ENST00000486427 CGNQ9P2M7 1197 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 BLOC1S6Q9UL45 172 aa2.56□□□□□ -2
LTN1-206ENST00000486427 GPATCH8Q9UKJ3 1502 aaKnown RBP2.56□□□□□ -2
LTN1-206ENST00000486427 IGHV5-10-1A0A0J9YXX1 117 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms