RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 JAZF1Q86VZ6 243 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 CXorf67Q86X51 503 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 TMEM123Q8N131 208 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 LRRC75AQ8NAA5 344 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 NOXO1Q8NFA2 376 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 FNDC8Q8TC99 324 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 MAGEE2Q8TD90 523 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 KISS1RQ969F8 398 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 EME1Q96AY2 570 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 LRR1Q96L50 414 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 GPX7Q96SL4 187 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 RBM4BQ9BQ04 359 aaKnown RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 C9orf16Q9BUW7 83 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 RBM4Q9BWF3 364 aaKnown RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 HDHD5Q9BXW7 423 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 GABARAPL1Q9H0R8 117 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 NRIP3Q9NQ35 241 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 SLC7A10Q9NS82 523 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 TAS2R16Q9NYV7 291 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 ADAM18Q9Y3Q7 739 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 IER3IP1Q9Y5U9 82 aa10.06□□□□□ -0.8
NUP50-216ENST00000486184 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 SPTBN1Q01082 2364 aaKnown RBP10.06□□□□□ -0.8
NUP50-216ENST00000486184 USP9XQ93008 2570 aaPredicted RBP10.05□□□□□ -0.8
NUP50-216ENST00000486184 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 CENPBD1B2RD01 187 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 C16orf97H3BN30 126 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 SOCS2O14508 198 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ARHGEF9O43307 516 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 UPK3AO75631 287 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 TRMUO75648 421 aaKnown RBP10.05□□□□□ -0.8
NUP50-216ENST00000486184 LYZL6O75951 148 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 OSMP13725 252 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 CDH2P19022 906 aaPredicted RBP10.05□□□□□ -0.8
NUP50-216ENST00000486184 IGFBP5P24593 272 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 EDNRAP25101 427 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 MPGP29372 298 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ZNF84P51523 738 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 FXYD6P3P58550 94 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 SORDQ00796 357 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ROR2Q01974 943 aaKnown RBP10.05□□□□□ -0.8
NUP50-216ENST00000486184 FAM27E3Q08E93 113 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ARMC4Q5T2S8 1044 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 C9orf135Q5VTT2 229 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 FAHD1Q6P587 224 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 BHLHA15Q7RTS1 189 aaPredicted RBP10.05□□□□□ -0.8
NUP50-216ENST00000486184 ADCK1Q86TW2 530 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 C20orf196Q8IYI0 205 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 GABRG1Q8N1C3 465 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ARIH2OSQ8N7S6 290 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 SYT14Q8NB59 555 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 STEAP2Q8NFT2 490 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 OR2T33Q8NG76 320 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 Q96M85 177 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 RBP7Q96R05 134 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 CIB1Q99828 191 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 ALG12Q9BV10 488 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 TSSK6Q9BXA6 273 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 DCLRE1BQ9H816 532 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 CRLF2Q9HC73 371 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 IL20Q9NYY1 176 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 GLTPQ9NZD2 209 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 NDRG3Q9UGV2 375 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 BAIAP2Q9UQB8 552 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 GPR52Q9Y2T5 361 aa10.05□□□□□ -0.8
NUP50-216ENST00000486184 PDLIM1O00151 329 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 IMPA2O14732 288 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 IDH3BO43837 385 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 RAD51DO75771 328 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 RENP00797 406 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 APEHP13798 732 aaKnown RBP10.04□□□□□ -0.8
NUP50-216ENST00000486184 ANPEPP15144 967 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 PPP3CBP16298 524 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 ZNF26P17031 533 aaPredicted RBP10.04□□□□□ -0.8
NUP50-216ENST00000486184 IGHV1-2P23083 117 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 GRNP28799 593 aaKnown RBP10.04□□□□□ -0.8
NUP50-216ENST00000486184 UGT2B10P36537 528 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 DAPP51397 102 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 SH3BGRP55822 239 aaPredicted RBP10.04□□□□□ -0.8
NUP50-216ENST00000486184 MYBPC1Q00872 1141 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 TFF3Q07654 80 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 LGALS3BPQ08380 585 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 TRIP10Q15642 601 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 STK11Q15831 433 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 CEACAM16Q2WEN9 425 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 OR7E24Q6IFN5 339 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 SLC27A4Q6P1M0 643 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 STAC2Q6ZMT1 411 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 ZNF519Q8TB69 540 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 TMEM54Q969K7 222 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 RASD2Q96D21 266 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
NUP50-216ENST00000486184 PRRG3Q9BZD7 231 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 SMURF2Q9HAU4 748 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms