RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ADAM18Q9Y3Q7 739 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 PRR14LQ5THK1 2151 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 A0A096LPE4 126 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 A0A1W2PPZ6 126 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 NPIPB13A6NJU9 1138 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CYSRT1A8MQ03 144 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 DEFB108AA8MXU0 73 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 NPIPB4C9JG80 1138 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 RPL36A-HNRNPH2H7BZ11 118 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 SIAH2O43255 324 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CTAG2O75638 210 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TRMUO75648 421 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 IGHMP01871 453 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 HRGP04196 525 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CD14P08571 375 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 ACADSP16219 412 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 ZNF26P17031 533 aaPredicted RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 GSSP48637 474 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 FXYD6P3P58550 94 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TUBA1BP68363 451 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TUBA4AP68366 448 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CD47Q08722 323 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 MICAQ29983 383 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TBRG1Q3YBR2 411 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 BEX5Q5H9J7 111 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 C1orf94Q6P1W5 598 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TUBA1AQ71U36 451 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 TMEM179BQ7Z7N9 219 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 P2RY8Q86VZ1 359 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 C17orf78Q8N4C9 275 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 PAPD5Q8NDF8 572 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 OR10G2Q8NGC3 310 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 GIPC3Q8TF64 312 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 HDAC2Q92769 488 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 LRR1Q96L50 414 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 MUS81Q96NY9 551 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 C1QTNF6Q9BXI9 259 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CLEC4MQ9H2X3 399 aaPredicted RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 OR52D1Q9H346 318 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 RASSF1Q9NS23 344 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 STX18Q9P2W9 335 aaKnown RBP10.39□□□□□ -0.75
HPS4-214ENST00000485842 POFUT2Q9Y2G5 429 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 AMDHD2Q9Y303 409 aa10.39□□□□□ -0.75
HPS4-214ENST00000485842 CELSR2Q9HCU4 2923 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 TEX13CA0A0J9YWL9 993 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 A6NIZ1 184 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 ZNF99A8MXY4 864 aaPredicted RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 H7C1C5 153 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 PTP4A3O75365 173 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 DEAF1O75398 565 aaPredicted RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 PPP1R3DO95685 299 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 GASTP01350 101 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 QDPRP09417 244 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 B4GALT1P15291 398 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 CAPZA2P47755 286 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 ZNF83P51522 516 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 KRTAP10-9P60411 292 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 UBE2NP61088 152 aaKnown RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 RAP1BP61224 184 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 LCN6P62502 163 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 RAP1AP62834 184 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 FMODQ06828 376 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 TSPAN31Q12999 210 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 GK3PQ14409 553 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 FAM205BPQ63HN1 556 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 ZNF770Q6IQ21 691 aaPredicted RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 ANKRD16Q6P6B7 361 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 SMARCD3Q6STE5 483 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 ZNF620Q6ZNG0 422 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 ZNF519Q8TB69 540 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 BCL2L2Q92843 193 aaPredicted RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 RASD2Q96D21 266 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 PLPPR2Q96GM1 343 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 SAMD8Q96LT4 415 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 Q96M85 177 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 HS3ST6Q96QI5 342 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 FOXB1Q99853 325 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 IFT27Q9BW83 186 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 NELFAQ9H3P2 528 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 EGLN3Q9H6Z9 239 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 NGBQ9NPG2 151 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 NPAP1Q9NZP6 1156 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 PDP1Q9P0J1 537 aaPredicted RBP10.38□□□□□ -0.75
HPS4-214ENST00000485842 GRHPRQ9UBQ7 328 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 DNAJB9Q9UBS3 223 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 IER3IP1Q9Y5U9 82 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 SLC25A15Q9Y619 301 aa10.38□□□□□ -0.75
HPS4-214ENST00000485842 CENPBD1B2RD01 187 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 M0R1B8 84 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 XKRYO14609 159 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ARHGEF9O43307 516 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 DHHO43323 396 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 GOSR1O95249 250 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 SLC2A10O95528 541 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms