RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.45	□□□□□ -0.58
UBA3-210	ENST00000485424	NANS	Q9NR45	359 aa		11.45	□□□□□ -0.58
UBA3-210	ENST00000485424	TANC2	Q9HCD6	1990 aa		11.45	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF503-AS2	A6NEH8	195 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	LRRN3	E7EW58	273 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424		M0R233	179 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	KPNA4	O00629	521 aa	Predicted RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	FARS2	O95363	451 aa	Known RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	CH25H	O95992	272 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	CD247	P20963	164 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	NR4A1	P22736	598 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	APEX1	P27695	318 aa	Known RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	RAB1A	P62820	205 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	REP15	Q6BDI9	236 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	DLEU7	Q6UYE1	221 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC35D2	Q76EJ3	337 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	PATL1	Q86TB9	770 aa	Known RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	CDK20	Q8IZL9	346 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	ADAMTS16	Q8TE57	1224 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF566	Q969W8	418 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	MRPL24	Q96A35	216 aa	Known RBP	11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	MAGEB18	Q96M61	343 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	CGREF1	Q99674	301 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	ARHGDIG	Q99819	225 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	SOX7	Q9BT81	388 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	MS4A5	Q9H3V2	200 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	RNF121	Q9H920	327 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC52A3	Q9NQ40	469 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC7A7	Q9UM01	511 aa		11.44	□□□□□ -0.58
UBA3-210	ENST00000485424	PKD1L1	Q8TDX9	2849 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424		A0A1W2PPW3	197 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	LRP5L	A4QPB2	252 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	TRAPPC13	A5PLN9	417 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SYNGR3	O43761	229 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	OR8G3P	P0DMU2	310 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	GIF	P27352	417 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	GIPR	P48546	466 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	CLRN1	P58418	232 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SELENOV	P59797	346 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	DUSP7	Q16829	419 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	MMEL1	Q495T6	779 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	TTMP	Q5BVD1	217 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	TMEM53	Q6P2H8	277 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	NANOGNB	Q7Z5D8	188 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	PTOV1	Q86YD1	416 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF786	Q8N393	782 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	OR6T1	Q8NGN1	323 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	MPP4	Q96JB8	637 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SNX18	Q96RF0	628 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SYT3	Q9BQG1	590 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SIKE1	Q9BRV8	207 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	NPHS2	Q9NP85	383 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	B3GNT2	Q9NY97	397 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	GLTP	Q9NZD2	209 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	REV1	Q9UBZ9	1251 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC7A8	Q9UHI5	535 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424	GPR160	Q9UJ42	338 aa		11.43	□□□□□ -0.58
UBA3-210	ENST00000485424		A0A0G2JND7	137 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC22A23	A1A5C7	686 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	MCIDAS	D6RGH6	385 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	TPST2	O60704	377 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	BCL10	O95999	233 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF14	P17017	642 aa	Predicted RBP	11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	PCMT1	P22061	227 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	PCGF2	P35227	344 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	GLRX	P35754	106 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	SRP14	P37108	136 aa	Known RBP	11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	EVX1	P49640	407 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF84	P51523	738 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	PCBP3	P57721	371 aa	Known RBP	11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	MELK	Q14680	651 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	RAB39A	Q14964	217 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF74	Q16587	644 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	LIPN	Q5VXI9	398 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF627	Q7L945	461 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	HDX	Q7Z353	690 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	SLC22A24	Q8N4F4	322 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	DPP10	Q8N608	796 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	LINC01356	Q8N9X3	169 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	OR10A6	Q8NH74	314 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	OR6X1	Q8NH79	312 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	TSPEAR	Q8WU66	669 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	STON2	Q8WXE9	905 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	HPS1	Q92902	700 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	SH3GL1	Q99961	368 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	WFDC6	Q9BQY6	131 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	MRPL37	Q9BZE1	423 aa	Known RBP	11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	KCNN2	Q9H2S1	579 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	CDH20	Q9HBT6	801 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	DUSP13	Q9UII6	198 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ZNF229	Q9UJW7	825 aa		11.42	□□□□□ -0.58
UBA3-210	ENST00000485424	ARHGAP32	A7KAX9	2087 aa		11.41	□□□□□ -0.58
UBA3-210	ENST00000485424		A0A1W2PRG6	482 aa		11.41	□□□□□ -0.58
UBA3-210	ENST00000485424	TMEM129	A0AVI4	362 aa		11.41	□□□□□ -0.58
UBA3-210	ENST00000485424	BLOC1S5-TXNDC5	H3BN57	136 aa		11.41	□□□□□ -0.58

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