RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 NFAM1Q8NET5 270 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ZG16BQ96DA0 208 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 C3orf30Q96M34 536 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 AGAP4Q96P64 663 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 DPH7Q9BTV6 452 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ACSS3Q9H6R3 686 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 SIRT7Q9NRC8 400 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ARL15Q9NXU5 204 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 FBXL4Q9UKA2 621 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 VWA7Q9Y334 891 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 KNL1Q8NG31 2342 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM114B3SHH9 223 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 RFXANKO14593 260 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 AIREO43918 545 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 OR10H2O60403 315 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GALR3O60755 368 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 IL18BPO95998 194 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ALDOCP09972 364 aaKnown RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 PVRP15151 417 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 TSPAN8P19075 237 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ARRB2P32121 409 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 TGFBR2P37173 567 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 KCNJ3P48549 501 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ART1P52961 327 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ATP1B3P54709 279 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 SLC34A1Q06495 639 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 TNXAQ16473 311 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 C5orf64Q2M2E5 130 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 XKR6Q5GH73 641 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 HLA-DQA1Q5Y7H0 255 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 FRMPD2BQ6IN97 320 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 FAM199XQ6PEV8 388 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 PLEKHG7Q6ZR37 379 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 PDIK1LQ8N165 341 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 SLC35F6Q8N357 371 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 OR51G2Q8NGK0 314 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 NUBPLQ8TB37 319 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 TCP10LQ8TDR4 215 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GGHQ92820 318 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 PIGTQ969N2 578 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 CIDECQ96AQ7 238 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF354BQ96LW1 612 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 RACGAP1Q9H0H5 632 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 SLC38A1Q9H2H9 487 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 ZFP69BQ9UJL9 534 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 IKZF3Q9UKT9 509 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 EIF3LQ9Y262 564 aaKnown RBP4.73□□□□□ -1.65
CCDC39-205ENST00000485055 B3GALT5Q9Y2C3 310 aa4.73□□□□□ -1.65
CCDC39-205ENST00000485055 GNG14A0A1W2PPG7 69 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 NPEPPSL1A6NEC2 478 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 PRSS44E7EML9 344 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SC5DO75845 299 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 DHFRP00374 187 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF37AP17032 561 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 GTF2E2P29084 291 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 LIPAP38571 399 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 BDKRB1P46663 353 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 RAP1GDS1P52306 607 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CDKN2DP55273 166 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 RAG2P55895 527 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TXNL4AP83876 142 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 DHODHQ02127 395 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 BNIP2Q12982 314 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 FASTKQ14296 549 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 KCTD19Q17RG1 926 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 PLEKHN1Q494U1 663 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CCSMST1Q4G0I0 132 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 GGTA1PQ4G0N0 100 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 YIF1BQ5BJH7 314 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ATP1A1-AS1Q5TC04 95 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 HECTD2Q5U5R9 776 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 C3orf33Q6P1S2 294 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 AGTRAPQ6RW13 159 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ANKRD37Q7Z713 158 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 MEX3DQ86XN8 651 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CSNK1A1LQ8N752 337 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 OR4C15Q8NGM1 316 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SSC4DQ8WTU2 575 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CA5BP1Q8WTZ4 195 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 GPR21Q99679 349 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ZCCHC4Q9H5U6 513 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 INTS9Q9NV88 658 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 NDE1Q9NXR1 346 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 BCAP29Q9UHQ4 241 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SAR1BQ9Y6B6 198 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CACNA1GO43497 2377 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TRAV17A0A0B4J275 112 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 HSPB2A8KAH6 182 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 E5RI56 91 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 NPIPB8E9PQR5 432 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SGK494L7N484 410 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ALOX12BO75342 701 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 NXPH2O95156 264 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 NADKO95544 446 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 OXSR1O95747 527 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ACTL6AO96019 429 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 CRYABP02511 175 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 EPXP11678 715 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms