RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SMCO2A6NFE2 343 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 OR2AG2A6NM03 316 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 LRRIQ3A6PVS8 624 aaPredicted RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 SIRPB1O00241 398 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 GOSR2O14653 212 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 ZNF861PO60384 105 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 OR2J3O76001 311 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 FGFR1OPO95684 399 aaKnown RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 ERCC1P07992 297 aaPredicted RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 CT62P0C5K7 136 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 CCNB1P14635 433 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 CXCR2P25025 360 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 ATP5C1P36542 298 aaKnown RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 MAGEA1P43355 309 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 GSSP48637 474 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 CX3CR1P49238 355 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 CCNHP51946 323 aaPredicted RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 GPX6P59796 221 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 TFDP3Q5H9I0 405 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 C1orf100Q5SVJ3 147 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 C22orf42Q6IC83 251 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 ZNF546Q86UE3 836 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 PIANPQ8IYJ0 282 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 LIX1Q8N485 282 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 LINC01555Q8NAE3 123 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 BPIFCQ8NFQ6 507 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 OR52I1Q8NGK6 324 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 OR4A4PQ8NGN8 299 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 OR2G2Q8NGZ5 317 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 RHEBL1Q8TAI7 183 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 C8orf44Q96CB5 159 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 PANX1Q96RD7 426 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 ATP5SQ99766 215 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 PELOQ9BRX2 385 aaKnown RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 DNTTIP1Q9H147 329 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 SLC25A22Q9H936 323 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 ANKRA2Q9H9E1 313 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 FANCEQ9HB96 536 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 AIG1Q9NVV5 245 aa2.63□□□□□ -1.99
SMC4-215ENST00000484799 MRPL22Q9NWU5 206 aaKnown RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 UXTQ9UBK9 157 aaPredicted RBP2.63□□□□□ -1.99
SMC4-215ENST00000484799 RLFQ13129 1914 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 AKNAQ7Z591 1439 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 C12orf71A8MTZ7 269 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 RAB29O14966 203 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 DNAJB6O75190 326 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 ALDOBP05062 364 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 OR8G3PP0DMU2 310 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 MYL2P10916 166 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 GZMAP12544 262 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 HPGDP15428 266 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 FUT3P21217 361 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 COX7A1P24310 79 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 HMOX2P30519 316 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 NSG1P42857 185 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 SLC1A1P43005 524 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 MRPL19P49406 292 aaKnown RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 SSR4P51571 173 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 TAS2R19P59542 299 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 ZNF763Q0D2J5 394 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 WDR43Q15061 677 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMC4-215ENST00000484799 XKR4Q5GH76 650 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 TMEM53Q6P2H8 277 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 TTC23LQ6PF05 361 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 C19orf35Q6ZS72 473 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 NIPA1Q7RTP0 329 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 SLC16A14Q7RTX9 510 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 FAM220AQ7Z4H9 259 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 KATNAL2Q8IYT4 538 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 H1FOOQ8IZA3 346 aaPredicted RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 ZNF557Q8N988 423 aaPredicted RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 VN1R2Q8NFZ6 395 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 UCN3Q969E3 161 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 TMEM246Q9BRR3 403 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 SLC25A39Q9BZJ4 359 aaPredicted RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 CLSTN2Q9H4D0 955 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 TMEM165Q9HC07 324 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 MRPS30Q9NP92 439 aaKnown RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 ADAP2Q9NPF8 381 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 SAMSN1Q9NSI8 373 aaKnown RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 GNPTGQ9UJJ9 305 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 MMP17Q9ULZ9 603 aa2.62□□□□□ -1.99
SMC4-215ENST00000484799 PHF3Q92576 2039 aaKnown RBP2.62□□□□□ -1.99
SMC4-215ENST00000484799 TRAV25A0A0B4J276 109 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 A0A1B0GTQ1 180 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 PANO1I0J062 215 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 CDC7O00311 574 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 MRPS12O15235 138 aaKnown RBP2.61□□□□□ -1.99
SMC4-215ENST00000484799 HUS1O60921 280 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 EIF3GO75821 320 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMC4-215ENST00000484799 GTF2E2P29084 291 aaKnown RBP2.61□□□□□ -1.99
SMC4-215ENST00000484799 RORAP35398 523 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 NAMPTP43490 491 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 UQCRFS1P47985 274 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 NPBWR2P48146 333 aa2.61□□□□□ -1.99
SMC4-215ENST00000484799 TMED10P49755 219 aaKnown RBP2.61□□□□□ -1.99
SMC4-215ENST00000484799 YWHAGP61981 247 aaKnown RBP eCLIP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms