RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	SEC22A	Q96IW7	307 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	PLEKHA8	Q96JA3	519 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	ZNF396	Q96N95	335 aa	Predicted RBP	4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	CNN2	Q99439	309 aa	Known RBP	4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	CHP1	Q99653	195 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	CENPK	Q9BS16	269 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	NIPAL2	Q9H841	368 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	VNN3	Q9NY84	501 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.87	□□□□□ -1.63
UBR3-210	ENST00000484596		Q9UF83	564 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	TTC41P	Q6P2S7	1318 aa		4.87	□□□□□ -1.63
UBR3-210	ENST00000484596	PSME4	Q14997	1843 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	SZT2	Q5T011	3432 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596		A0A1W2PPV9	198 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	CCDC182	A6NF36	153 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	OR2AG2	A6NM03	316 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	HIP1	O00291	1037 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	HTR1F	P30939	366 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	CALCR	P30988	508 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	PTGDS	P41222	190 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	OXA1L	Q15070	435 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	MICB	Q29980	383 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	ISX	Q2M1V0	245 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	CARD16	Q5EG05	197 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	PAGE2B	Q5JRK9	111 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	SPANXN2	Q5MJ10	180 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	C1orf185	Q5T7R7	199 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	OR52E8	Q6IFG1	317 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	LRRC31	Q6UY01	552 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	DNM1P46	Q6ZS02	220 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	BBOF1	Q8ND07	529 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	MCUR1	Q96AQ8	359 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	HAVCR1	Q96D42	359 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	TM4SF19	Q96DZ7	209 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	KIR2DL4	Q99706	377 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	MTG1	Q9BT17	334 aa	Predicted RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	SRXN1	Q9BYN0	137 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	NMUR2	Q9GZQ4	415 aa		4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	THUMPD1	Q9NXG2	353 aa	Known RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	NOSIP	Q9Y314	301 aa	Known RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596	RPL36	Q9Y3U8	105 aa	Known RBP	4.86	□□□□□ -1.63
UBR3-210	ENST00000484596		H0YIV9	168 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	HSD17B6	O14756	317 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	DFNA5	O60443	496 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	UGT1A9	O60656	530 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	TMEM50A	O95807	157 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	MMP1	P03956	469 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596		P04436	131 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	GIG44	P09565	113 aa	Predicted RBP	4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	ETV1	P50549	477 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	P2RY4	P51582	365 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	CCDC173	Q0VFZ6	552 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	ARL6IP1	Q15041	203 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	ZNF77	Q15935	545 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	HSDL2	Q6YN16	418 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	LRRC74B	Q6ZQY2	392 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	C17orf82	Q86X59	251 aa	Predicted RBP	4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	PSTK	Q8IV42	348 aa	Known RBP	4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	ZNF584	Q8IVC4	421 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	NUDCD3	Q8IVD9	361 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	OR13F1	Q8NGS4	319 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	TSNARE1	Q96NA8	513 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	GAL3ST1	Q99999	423 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	APOBEC3B	Q9UH17	382 aa	Known RBP	4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	KIAA1257	Q9ULG3	409 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	TRAF3IP3	Q9Y228	551 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	FLVCR1	Q9Y5Y0	555 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596		A0A1B0GUL6	1792 aa		4.85	□□□□□ -1.63
UBR3-210	ENST00000484596	DUOX1	Q9NRD9	1551 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	CEMIP	Q8WUJ3	1361 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	IGLV8-61	A0A075B6I0	122 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596		C9JVG2	144 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	WRB	O00258	174 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	DCTN6	O00399	190 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	TNFSF11	O14788	317 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	CDH16	O75309	829 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	E2F6	O75461	281 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	IGLL1	P15814	213 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	KLK2	P20151	261 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	KITLG	P21583	273 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	IL12A	P29459	219 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	FDFT1	P37268	417 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	DDOST	P39656	456 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	CDH6	P55285	790 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	BID	P55957	195 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	SCRN3	Q0VDG4	424 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	SLC39A6	Q13433	755 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	ARHGAP19	Q14CB8	494 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	GPRC6A	Q5T6X5	926 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	FHL5	Q5TD97	284 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	CLEC2A	Q6UVW9	174 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	C19orf35	Q6ZS72	473 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	ACOT7L	Q6ZUV0	252 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	BZW1	Q7L1Q6	419 aa	Known RBP	4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	ERI1	Q8IV48	349 aa	Known RBP	4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	SKA3	Q8IX90	412 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	OR4F6	Q8NGB9	312 aa		4.84	□□□□□ -1.63
UBR3-210	ENST00000484596	OXGR1	Q96P68	337 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms