RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 BCKDKO14874 412 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 AIREO43918 545 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 BBOX1O75936 387 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 FLOT1O75955 427 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RBMY1DP0C7P1 496 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RBMY1A1P0DJD3 496 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 CD82P27701 267 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RGRP47804 291 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 SLC26A2P50443 739 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 ACVR1Q04771 509 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 CYTH1Q15438 398 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 HNRNPA1L2Q32P51 320 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 H3F3CQ6NXT2 135 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 PAMR1Q6UXH9 720 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 HDDC2Q7Z4H3 204 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 HSD17B13Q7Z5P4 300 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 TMEM135Q86UB9 458 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 CDC20BQ86Y33 519 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 PRR22Q8IZ63 422 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 TMEM252Q8N6L7 170 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 SLC7A13Q8TCU3 470 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 CXorf40AQ8TE69 158 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 LRRC39Q96DD0 335 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 SIKE1Q9BRV8 207 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RIOK2Q9BVS4 552 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 ZDHHC11Q9H8X9 412 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 SAMSN1Q9NSI8 373 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 HRASLS2Q9NWW9 162 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 QPCTLQ9NXS2 382 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 MYEF2Q9P2K5 600 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 SLC17A4Q9Y2C5 497 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 CNTNAP1P78357 1384 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 A0A1B0GUH1 482 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 A0A1W2PPV4 95 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 C12orf77C9JDV5 145 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 AGPAT2O15120 278 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF780AO75290 641 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 CCNB2O95067 398 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 CLIC3O95833 236 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 HLA-HP01893 362 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 UBTFL6P0CB48 400 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 STAG3L2P0CL84 134 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SHC1P29353 583 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 PRKAR2BP31323 418 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 LONP1P36776 959 aaKnown RBP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 AQP2P41181 271 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 MEOX2P50222 304 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SUB1P53999 127 aaKnown RBP eCLIP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 CRISP1P54107 249 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 DLX1P56177 255 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 NCF4Q15080 339 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 HSP90AA4PQ58FG1 418 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ATAD3CQ5T2N8 411 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ANKRD26P1Q6NSI1 321 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SPESP1Q6UW49 350 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 TMIGD1Q6UXZ0 262 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF677Q86XU0 584 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 CMTM1Q8IZ96 169 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SLC39A11Q8N1S5 342 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF485Q8NCK3 441 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 OR2L2Q8NH16 312 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 OR8K3Q8NH51 312 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 OR52E5Q8NH55 327 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 LYPD6BQ8NI32 183 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 FRAT1Q92837 279 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 RAB1CQ92928 201 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 TOP1MTQ969P6 601 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ASB9Q96DX5 294 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 EBF4Q9BQW3 602 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 UCK2Q9BZX2 261 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ROGDIQ9GZN7 287 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 FBXO44Q9H4M3 255 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 PTGES2Q9H7Z7 377 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SIAEQ9HAT2 523 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 CALYQ9NYX4 217 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 ASF1AQ9Y294 204 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 SAR1BQ9Y6B6 198 aa3.36□□□□□ -1.87
VPS13A-211ENST00000484581 A0A1W2PRD5 423 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 USP27XA6NNY8 438 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 SERPINE3A8MV23 424 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ERVV-1B6SEH8 477 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 FCN3O75636 299 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 EIF3GO75821 320 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 TGM6O95932 706 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 MBP02144 154 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 TNFSF9P41273 254 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 SLC1A2P43004 574 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 VDAC2P45880 294 aaPredicted RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 P2RY4P51582 365 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 CSNK1G2P78368 415 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 IRX3P78415 501 aaPredicted RBP3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF45Q02386 682 aa3.35□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF92Q03936 586 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms