RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RBBP4Q09028 425 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 RPS26P11Q5JNZ5 115 aaPredicted RBP9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 TMEM255AQ5JRV8 349 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 RNF220Q5VTB9 566 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 H1FNTQ75WM6 255 aaPredicted RBP9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 LRRC34Q8IZ02 419 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC30A7Q8NEW0 376 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 VPS37AQ8NEZ2 397 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 ZNF519Q8TB69 540 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 ST7LQ8TDW4 575 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 TESCQ96BS2 214 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 LRR1Q96L50 414 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 ULBP2Q9BZM5 246 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 MS4A7Q9GZW8 240 aaPredicted RBP9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 AKTIPQ9H8T0 292 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 SLCO1C1Q9NYB5 712 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC17A7Q9P2U7 560 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 GPR160Q9UJ42 338 aa9.19□□□□□ -0.94
SMARCC1-205ENST00000483847 A0A087WUJ7 227 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 UBOX5O94941 541 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 IGHV1-46P01743 117 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 ZNF12P17014 697 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 SELENOVP59797 346 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 WHAMMP3Q1A5X7 153 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 SMU1Q2TAY7 513 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 FBLN7Q53RD9 439 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 FAM69AQ5T7M9 428 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 C16orf87Q6PH81 154 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 BRICD5Q6PL45 260 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 WDR88Q6ZMY6 472 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 C17orf107Q6ZR85 190 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 ZNF621Q6ZSS3 439 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 MIER2Q8N344 545 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 ICA1LQ8NDH6 482 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 OR6N1Q8NGY5 312 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 C11orf40Q8WZ69 217 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 ELMOD3Q96FG2 381 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 TEX37Q96LM6 180 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 PANX1Q96RD7 426 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 SH3GL3Q99963 347 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 CITED1Q99966 193 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 NPHS2Q9NP85 383 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 B3GAT2Q9NPZ5 323 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC6A13Q9NSD5 602 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 KLHL14Q9P2G3 628 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 BTNL2Q9UIR0 455 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 PRDM4Q9UKN5 801 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 FBXL3Q9UKT7 428 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 INSIG2Q9Y5U4 225 aa9.18□□□□□ -0.94
SMARCC1-205ENST00000483847 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ZSCAN5BA6NJL1 495 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 M0QZ24 198 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 HOXA3O43365 443 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SPRY3O43610 288 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 OR2T1O43869 369 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SERPINI2O75830 405 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 IGHV3-13P01766 116 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 IGHMP01871 453 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 BCHEP06276 602 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ETFAP13804 333 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 NQO1P15559 274 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 S100A3P33764 101 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ANXA11P50995 505 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ZNF81P51508 661 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 MVDP53602 400 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 UCP2P55851 309 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 NME5P56597 212 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 RELBQ01201 579 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ASPHD2Q6ICH7 369 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 C6orf89Q6UWU4 347 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 PIWIL3Q7Z3Z3 882 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC22A24Q8N4F4 322 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 ADPRHL1Q8NDY3 354 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC38A5Q8WUX1 472 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC38A4Q969I6 547 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SLC41A3Q96GZ6 507 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 APOPT1Q96IL0 206 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 DCLRE1CQ96SD1 692 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 RBM4BQ9BQ04 359 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 SPATA9Q9BWV2 254 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 CDH20Q9HBT6 801 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 TCF7L2Q9NQB0 619 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 TESQ9UGI8 421 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 EGFL7Q9UHF1 273 aa9.17□□□□□ -0.94
SMARCC1-205ENST00000483847 TRAV36DV7A0A075B6V5 113 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 A0A1B0GWA3 101 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 ZNF726A6NNF4 738 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 LRRN3E7EW58 273 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 E9PBE3 544 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 TM9SF1O15321 606 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 ITM2AO43736 263 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 SPAG7O75391 227 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 SNAP29O95721 258 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 TSPAN15O95858 294 aa9.16□□□□□ -0.94
SMARCC1-205ENST00000483847 IGHV2-70P01814 119 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms