RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LRRTM2O43300 516 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 IFNGR1P15260 489 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 ZNF19P17023 458 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 TCEA1P23193 301 aaKnown RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 ITGA3P26006 1051 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 FABP5Q01469 135 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 OC90Q02509 493 aaPredicted RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 CDC20BQ86Y33 519 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 OR6Q1Q8NGQ2 317 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 TXNDC15Q96J42 360 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 OXGR1Q96P68 337 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 PIGQQ9BRB3 760 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 UTP23Q9BRU9 249 aaKnown RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 MFRPQ9BY79 579 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 OR2B2Q9GZK3 357 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 MMP27Q9H306 513 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
CLK3-204ENST00000483723 AQP7P3A6NL99 342 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 NPIPA5E9PKD4 350 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 OPN1LWP04000 364 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 HLA-DPB1P04440 258 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CD1AP06126 327 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 RFPL3SP0C7P2 107 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 SFTPDP35247 375 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 PTGS2P35354 604 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CASRP41180 1078 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 ENTPD1P49961 510 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 BMXP51813 675 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 MELKQ14680 651 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 RTP5Q14D33 572 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CRTC2Q53ET0 693 aaPredicted RBP12.57□□□□□ -0.4
CLK3-204ENST00000483723 SPINK14Q6IE38 97 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 TMEM203Q969S6 136 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 PELI1Q96FA3 418 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 SIGLEC12Q96PQ1 595 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 TM9SF2Q99805 663 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
CLK3-204ENST00000483723 ZFP64Q9NPA5 681 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 NPIPA1Q9UND3 350 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
CLK3-204ENST00000483723 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 PINLYPA6NC86 204 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 SULT2B1O00204 365 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 WDPCPO95876 746 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CTLA4P16410 223 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 ALOX5APP20292 161 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CRABP1P29762 137 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 RPS19P39019 145 aaKnown RBP12.57□□□□□ -0.4
CLK3-204ENST00000483723 POU3F1Q03052 451 aaPredicted RBP12.57□□□□□ -0.4
CLK3-204ENST00000483723 TBC1D25Q3MII6 688 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 RAET1LQ5VY80 246 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 TMEM91Q6ZNR0 172 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 KCTD20Q7Z5Y7 419 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 CLEC1AQ8NC01 280 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 KCNE4Q8WWG9 221 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 FAM173AQ9BQD7 235 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 GSTK1Q9Y2Q3 226 aa12.57□□□□□ -0.4
CLK3-204ENST00000483723 MED13Q9UHV7 2174 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 FREM3P0C091 2139 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 A0A0J9YW62 118 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 CENPBD1B2RD01 187 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 DNPH1O43598 174 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 TRAF3IP2O43734 574 aaPredicted RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 SLC16A7O60669 478 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 IL1AP01583 271 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 AGFG1P52594 562 aaKnown RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 GBX2P52951 348 aaPredicted RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 TRAM1Q15629 374 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 ZNF829Q3KNS6 432 aaPredicted RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 CCDC58Q4VC31 144 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 TP53I3Q53FA7 332 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 ASB18Q6ZVZ8 466 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 UEVLDQ8IX04 471 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 GALNT16Q8N428 558 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 FAM83FQ8NEG4 500 aaPredicted RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 OR2M7Q8NG81 312 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 SNX33Q8WV41 574 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 DTNBP1Q96EV8 351 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 PGLYRP3Q96LB9 341 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 ADAD1Q96M93 576 aaKnown RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 KLHL15Q96M94 604 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 KCTD7Q96MP8 289 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 INTS14Q96SY0 518 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 WDR76Q9H967 626 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 PLGRKTQ9HBL7 147 aa12.56□□□□□ -0.4
CLK3-204ENST00000483723 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
CLK3-204ENST00000483723 BOKQ9UMX3 212 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms