RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ZNF346Q9UL40 294 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 IFT52Q9Y366 437 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 IGKV1D-42A0A075B6H8 117 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TRAV36DV7A0A075B6V5 113 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 A0A087WUJ7 227 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 A0A1B0GWA3 101 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TMEM247A6NEH6 219 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 C17orf100A8MU93 164 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 J3QLI3 93 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FZD7O75084 574 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 DEAF1O75398 565 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SERPINA5P05154 406 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FAM157BP0CG42 384 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FPR2P25090 351 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 LSP1P33241 339 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 GNALP38405 381 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 RAD52P43351 418 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SELENOVP59797 346 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 UBA52P62987 128 aaKnown RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FOXL1Q12952 345 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 GTDC1Q4AE62 458 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 PDLIM3Q53GG5 364 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 DCAF12L2Q5VW00 463 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 RGS7BPQ6MZT1 257 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 OGFOD2Q6N063 350 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TMEM154Q6P9G4 183 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SHISA2Q6UWI4 295 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 C6orf89Q6UWU4 347 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 NHLRC1Q6VVB1 395 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF771Q7L3S4 317 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF627Q7L945 461 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SKA3Q8IX90 412 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 MIER2Q8N344 545 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FGFBP3Q8TAT2 258 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SLC38A4Q969I6 547 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 RAB39BQ96DA2 213 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TMEM19Q96HH6 336 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TSPAN32Q96QS1 320 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SORT1Q99523 831 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 FOXB1Q99853 325 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 ULBP2Q9BZM5 246 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 ROPN1BQ9BZX4 212 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 OR51B6Q9H340 312 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 DENND2DQ9H6A0 471 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 MEAF6Q9HAF1 191 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 ROPN1Q9HAT0 212 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-206ENST00000483030 TPT1P8Q9HAU6 139 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 AIG1Q9NVV5 245 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 SLC7A8Q9UHI5 535 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 OPN4Q9UHM6 478 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 GPR160Q9UJ42 338 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 PPIAL4AQ9Y536 164 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 GPR45Q9Y5Y3 372 aa6.3□□□□□ -1.4
CSDE1-206ENST00000483030 IGHV1-69-2A0A0G2JMI3 117 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SDHDO14521 159 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 BIRC5O15392 142 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SERPINI2O75830 405 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 PRSS23O95084 383 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 UBL3O95164 117 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ANP32DO95626 131 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 IGHV2-5P01817 119 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 RPLP1P05386 114 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 LCKP06239 509 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 HNRNPCP07910 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 HKR1P10072 659 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ARAFP10398 606 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 CCL2P13500 99 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 BGNP21810 368 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 AHCYP23526 432 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 HTR2AP28223 471 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 CRYBB2P43320 205 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ERVS71-1P61550 626 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 TEKQ02763 1124 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 GABPB1Q06547 395 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ZP4Q12836 540 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 STX3Q13277 289 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 PMS2P3Q13401 168 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 TSTQ16762 297 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 PCGF3Q3KNV8 242 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ALG10BQ5I7T1 473 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 C5orf46Q6UWT4 87 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 TREML4Q6UXN2 200 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 RBMS3Q6XE24 437 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 USP51Q70EK9 711 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 PIWIL3Q7Z3Z3 882 aaKnown RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SNX32Q86XE0 403 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF584Q8IVC4 421 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 PAQR4Q8N4S7 273 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 C10orf53Q8N6V4 93 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 LSMEM1Q8N8F7 131 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 ADPRHL1Q8NDY3 354 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SYNPRQ8TBG9 265 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 SNX33Q8WV41 574 aa6.29□□□□□ -1.4
CSDE1-206ENST00000483030 DNAJA4Q8WW22 397 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-206ENST00000483030 C11orf40Q8WZ69 217 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms